fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043913 not found in 197aa AT4G14540.1 not_1st 0.75 II
Pt004980 not found in 183aa AT4G14540.1 not_1st 0.742753623 II
Pt029632 not found in 167aa AT4G14540.1 not_1st 0.731884057 II
Pt000530 not found in 224aa AT4G14540.1 not_1st 0.659420289 II
Pt036929 not found in 210aa AT4G14540.1 not_1st 0.648550724 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14540.1     -MADSDNDSGGHKDGG-----NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQ
pt043913_POPTR_ -MADSDNESGEQNNSNTNYSTETSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ
pt036929_POPTR_ MTGKRTQISPIGSPLSENISESSSKLEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQ
pt000530_POPTR_ MTGKGTQSSPIGSPSSENISDSSSKLEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQ
pt004980_POPTR_ -MADSDNESGGQNNSNTNYS-ETSSREQDKLLPIANVSRIMKKALPANAKISKDGKETVQ
pt029632_POPTR_ -MADSDNDSGGQNPTSTNE--LFSPREMDRFLPVANVSRIMKKALPANAKISKEAKETVQ
                  ..  : *   .  .       *  * *::**:*********:*********:.*****

AT4G14540.1     ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGE
pt043913_POPTR_ ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKFREMEGE
pt036929_POPTR_ ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFENYVGSLKVYLNKYRDTEGE
pt000530_POPTR_ ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGSLKVYLNKYRETEGE
pt004980_POPTR_ ECVSEFISFITGEASDKCQREKRKTVNGDDLLWAMTTLGFEDYAEPLKIYLQKFRETEGE
pt029632_POPTR_ ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE
                *************************:*********:*****:*. .**:**:::*: ***

AT4G14540.1     KTTTAG--RQGDKE-----------GGGGGGGAGSGSGGA--------------------
pt043913_POPTR_ KTAAMGIVRQGDQRDGTAGDGGVVNSGNPGGGFGGGGGGN--------------------
pt036929_POPTR_ KNSMA---RQEDQL-------SPTNHGSLGTHETIKVNGS---PSLSTGMDLQSFNAGLY
pt000530_POPTR_ KNSMA---RQEDQL-------SPTNHGTVGTHETNKVNGTLTDP--STEMDLQSFNNGLY
pt004980_POPTR_ RTAAMGTVRQGDQR-----DGAVVNSGDSGGGF-GGSGGN--------------------
pt029632_POPTR_ KNTVA---RDRDAP-----------SNGSGPGA-EGFSGY--------------------
                :.:     *: *              .  *       .*                     

AT4G14540.1     --------PMYGG--GMVTTMGHQFSHHFS------------------------------
pt043913_POPTR_ ---------MYVGMQSSMAMMGH---HHYQHRHPGNMYGPGGGASSGRPS----------
pt036929_POPTR_ SLGTEVTAKSYG---QNTRFLGYQESSMIVELR--------------RISMKSYVCSFNT
pt000530_POPTR_ SLGTEVTAKSYG---ENTRLLGYQENFMAGDFNMNRI-----GENGDRNSERARAAQLYH
pt004980_POPTR_ ---------VYGGMQSSMMMMGH---HPL---HQGNMY----GSASGRPK----------
pt029632_POPTR_ ---------VYGSGAGFFNQVGG----------------GGAGDSLGRLR----------
                          *         :*                                      

AT4G14540.1     ----
pt043913_POPTR_ ----
pt036929_POPTR_ ----
pt000530_POPTR_ GVRW
pt004980_POPTR_ ----
pt029632_POPTR_ ----
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     - M A D S D N D S G G H K D G G - - - - - N A S T R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q
pt043913_POPTR_    - M A D S D N E S G E Q N N S N T N Y S T E T S P R E Q D R L L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q
pt036929_POPTR_    M T G K R T Q I S P I G S P L S E N I S E S S S K L E Q D R F L P I A N V S R I M K K S L P A N A K I S K E A K E T V Q
pt000530_POPTR_    M T G K G T Q S S P I G S P S S E N I S D S S S K L E Q D R F L P I A N V S R I M K K S L P A N A K I S K E A K E T V Q
pt004980_POPTR_    - M A D S D N E S G G Q N N S N T N Y S - E T S S R E Q D K L L P I A N V S R I M K K A L P A N A K I S K D G K E T V Q
pt029632_POPTR_    - M A D S D N D S G G Q N P T S T N E - - L F S P R E M D R F L P V A N V S R I M K K A L P A N A K I S K E A K E T V Q
 
AT4G14540.1     E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G E
pt043913_POPTR_    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K I Y L Q K F R E M E G E
pt036929_POPTR_    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E N Y V G S L K V Y L N K Y R D T E G E
pt000530_POPTR_    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E N Y V G S L K V Y L N K Y R E T E G E
pt004980_POPTR_    E C V S E F I S F I T G E A S D K C Q R E K R K T V N G D D L L W A M T T L G F E D Y A E P L K I Y L Q K F R E T E G E
pt029632_POPTR_    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E E Y V E P L K V Y L Q R F R E M E G E
 
AT4G14540.1     K T T T A G - - R Q G D K E - - - - - - - - - - - G G G G G G G A G S G S G G A - - - - - - - - - - - - - - - - - - - -
pt043913_POPTR_    K T A A M G I V R Q G D Q R D G T A G D G G V V N S G N P G G G F G G G G G G N - - - - - - - - - - - - - - - - - - - -
pt036929_POPTR_    K N S M A - - - R Q E D Q L - - - - - - - S P T N H G S L G T H E T I K V N G S - - - P S L S T G M D L Q S F N A G L Y
pt000530_POPTR_    K N S M A - - - R Q E D Q L - - - - - - - S P T N H G T V G T H E T N K V N G T L T D P - - S T E M D L Q S F N N G L Y
pt004980_POPTR_    R T A A M G T V R Q G D Q R - - - - - D G A V V N S G D S G G G F - G G S G G N - - - - - - - - - - - - - - - - - - - -
pt029632_POPTR_    K N T V A - - - R D R D A P - - - - - - - - - - - S N G S G P G A - E G F S G Y - - - - - - - - - - - - - - - - - - - -
 
AT4G14540.1     - - - - - - - - P M Y G G - - G M V T T M G H Q F S H H F S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt043913_POPTR_    - - - - - - - - - M Y V G M Q S S M A M M G H - - - H H Y Q H R H P G N M Y G P G G G A S S G R P S - - - - - - - - - -
pt036929_POPTR_    S L G T E V T A K S Y G - - - Q N T R F L G Y Q E S S M I V E L R - - - - - - - - - - - - - - R I S M K S Y V C S F N T
pt000530_POPTR_    S L G T E V T A K S Y G - - - E N T R L L G Y Q E N F M A G D F N M N R I - - - - - G E N G D R N S E R A R A A Q L Y H
pt004980_POPTR_    - - - - - - - - - V Y G G M Q S S M M M M G H - - - H P L - - - H Q G N M Y - - - - G S A S G R P K - - - - - - - - - -
pt029632_POPTR_    - - - - - - - - - V Y G S G A G F F N Q V G G - - - - - - - - - - - - - - - - G G A G D S L G R L R - - - - - - - - - -
 
AT4G14540.1     - - - -
pt043913_POPTR_    - - - -
pt036929_POPTR_    - - - -
pt000530_POPTR_    G V R W
pt004980_POPTR_    - - - -
pt029632_POPTR_    - - - -
 
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