fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016647 not found in 182aa AT4G14540.1 1st_1st 0.778985507 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14540.1     MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF
pt016647_POPTR_ MADSDNESGGHNAVSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF
                ******:****:  .: *::****************************************

AT4G14540.1     ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG
pt016647_POPTR_ ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSMGR
                ***********************************:******:*******:****:: . 

AT4G14540.1     RQGDKEGG------GGGGGAGSGSGGAPMYGGGMVTTMGHQFSHHFS-------------
pt016647_POPTR_ PAGEKDGGGGANSTGGGGGGFNGGGGQGMYGGMMM--MGHHHQGHVYGAGGFHHQGNSRA
                  *:*:**      *****. .*.**  **** *:  ***:.. *.              

AT4G14540.1     ----
pt016647_POPTR_ NDPP
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     M A D S D N D S G G H K D G G N A S T R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q E C V S E F
pt016647_POPTR_    M A D S D N E S G G H N A V S E L S A K E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q E C V S E F
 
AT4G14540.1     I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G E K T T T A G
pt016647_POPTR_    I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E E Y V E P L K I Y L Q K Y R E M E G E K S S M G R
 
AT4G14540.1     R Q G D K E G G - - - - - - G G G G G A G S G S G G A P M Y G G G M V T T M G H Q F S H H F S - - - - - - - - - - - - -
pt016647_POPTR_    P A G E K D G G G G A N S T G G G G G G F N G G G G Q G M Y G G M M M - - M G H H H Q G H V Y G A G G F H H Q G N S R A
 
AT4G14540.1     - - - -
pt016647_POPTR_    N D P P
 
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