fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028983 not found in 224aa AT4G14540.1 1st_1st 0.739130434 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14540.1     MADSDNDSGGHKDGGN-ASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE
Os028983_Os07t0 MPDSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSE
                *.****:*** .:.*: **:*****************:**********************

AT4G14540.1     FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTA
Os028983_Os07t0 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAIGA
                **************************************::***:**:*:**:****:  *

AT4G14540.1     GRQGDKEGGG----GGGGAGSGS----------GGAPMY--GGGMVTTMG----------
Os028983_Os07t0 AGSG---GGGAASSGGSGSGSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPMYGSPPAS
                . .*   ***    **.*:****          **  **  ****:  **          

AT4G14540.1     ----------HQFSHHFS-----------------------------
Os028983_Os07t0 SAGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGGGPSPSSGYGRQDRL
                          *:. *::
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     M A D S D N D S G G H K D G G N - A S T R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q E C V S E
Os028983_Os07t0    M P D S D N E S G G P S N A G E Y A S A R E Q D R F L P I A N V S R I M K R A L P A N A K I S K D A K E T V Q E C V S E
 
AT4G14540.1     F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G E K T T T A
Os028983_Os07t0    F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y I D P L K L Y L H K F R E L E G E K A I G A
 
AT4G14540.1     G R Q G D K E G G G - - - - G G G G A G S G S - - - - - - - - - - G G A P M Y - - G G G M V T T M G - - - - - - - - - -
Os028983_Os07t0    A G S G - - - G G G A A S S G G S G S G S G S H H H Q D A S R N N G G Y G M Y G G G G G M I M M M G Q P M Y G S P P A S
 
AT4G14540.1     - - - - - - - - - - H Q F S H H F S - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os028983_Os07t0    S A G Y A Q P P P P H H H H H Q M V M G G K G A Y G H G G G G G G G P S P S S G Y G R Q D R L
 
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