fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb001867 not found in 225aa AT4G14540.1 not_1st 0.735507246 II
Sb015253 not found in 275aa AT4G14540.1 not_1st 0.666666666 II
Sb032742 not found in 609aa AT4G14540.1 not_1st 0.663043478 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14540.1     ------------------MADSDNDSG------------------GHKDGGN--ASTREQ
Sb015253_Sorbi1 MKSRKGYGHQGHLLSPVGSPPSDNESGAVAAAATAGGGGGCGSSVGYCGGGGGESPAKEQ
Sb001867_Sorbi1 ------------------MPDSDNDSG------------------GPSNAGGELSSPREQ
Sb032742_Sorbi1 -------------------RRPSRLTG---------------------------RSPRTP
                                     ... :*                            ..:  

AT4G14540.1     DRFLPIANVSR------IMKKALPANAKISKDAKETV----------------QECVSEF
Sb015253_Sorbi1 DRFLPIANVSR------IMKRSLPANAKISKEAKETV----------------QECVSEF
Sb001867_Sorbi1 DRFLPIANVSR------IMKKALPANAKISKDAKETV----------------QECVSEF
Sb032742_Sorbi1 RR--PCRSASQSSSPSSLAKRVTSARGRSGRPSTATTCCGPWPHWGLRTTLNHSRCTCR-
                 *  *  ..*:      : *:  .*..: .: :. *.                ..*... 

AT4G14540.1     ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEK-TTTA
Sb015253_Sorbi1 ISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEAYVSPLKSYLNRYREAEGEKAAVLG
Sb001867_Sorbi1 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAAASA
Sb032742_Sorbi1 ---STERASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEMEGDSKLT
                    * .**********************:***** *:.*** **:::** * *  :   

AT4G14540.1     G-----------RQGD---KEG-----------GGGGGGAG---SGSGGAPMYGGGMVTT
Sb015253_Sorbi1 GA----------RHGDGAVDDGPLA-AGGAVPPSGAAGGDR---AGHDGAADADAHVGLM
Sb001867_Sorbi1 GASGSNTAVQHQQQGDV-VQRG-----------AANAGGY----AGYGGAPG-AAGMMMM
Sb032742_Sorbi1 A-----------KTGDGSIKKDALGHVGGSS--SAAQGGDSKLTAKTGDGSIKKDALGHV
                .           : **   . .           ..  **     :  ....     :   

AT4G14540.1     MG------------------------HQFSHHFS--------------------------
Sb015253_Sorbi1 MGGASSVVGFGAGGG-----------AAASYYTAT-------AARKAYGAGEGSTKVMEF
Sb001867_Sorbi1 MGQPM----YGSPQQQQPPPPPPSQQQQQQHHMAM-------GGRGGFGHQGGG------
Sb032742_Sorbi1 GGSSSAAQGMG---------------QQGAYNQGMGYMQPQMGQQGAYNQGMGY---MQP
                 *                            :  .                          

AT4G14540.1     ------------------------------
Sb015253_Sorbi1 EGIAGEEENGGVQR-GRGFANNHLHGAVQW
Sb001867_Sorbi1 -GGGGSSSSSGLGRQDRA------------
Sb032742_Sorbi1 QYHNGDISN---------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     - - - - - - - - - - - - - - - - - - M A D S D N D S G - - - - - - - - - - - - - - - - - - G H K D G G N - - A S T R E Q
Sb015253_Sorbi1    M K S R K G Y G H Q G H L L S P V G S P P S D N E S G A V A A A A T A G G G G G C G S S V G Y C G G G G G E S P A K E Q
Sb001867_Sorbi1    - - - - - - - - - - - - - - - - - - M P D S D N D S G - - - - - - - - - - - - - - - - - - G P S N A G G E L S S P R E Q
Sb032742_Sorbi1    - - - - - - - - - - - - - - - - - - - R R P S R L T G - - - - - - - - - - - - - - - - - - - - - - - - - - - R S P R T P
 
AT4G14540.1     D R F L P I A N V S R - - - - - - I M K K A L P A N A K I S K D A K E T V - - - - - - - - - - - - - - - - Q E C V S E F
Sb015253_Sorbi1    D R F L P I A N V S R - - - - - - I M K R S L P A N A K I S K E A K E T V - - - - - - - - - - - - - - - - Q E C V S E F
Sb001867_Sorbi1    D R F L P I A N V S R - - - - - - I M K K A L P A N A K I S K D A K E T V - - - - - - - - - - - - - - - - Q E C V S E F
Sb032742_Sorbi1    R R - - P C R S A S Q S S S P S S L A K R V T S A R G R S G R P S T A T T C C G P W P H W G L R T T L N H S R C T C R -
 
AT4G14540.1     I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G E K - T T T A
Sb015253_Sorbi1    I S F V T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E A Y V S P L K S Y L N R Y R E A E G E K A A V L G
Sb001867_Sorbi1    I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V D P L K H Y L H K F R E I E G E R A A A S A
Sb032742_Sorbi1    - - - S T E R A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L Q K Y R E M E M E G D S K L T
 
AT4G14540.1     G - - - - - - - - - - - R Q G D - - - K E G - - - - - - - - - - - G G G G G G A G - - - S G S G G A P M Y G G G M V T T
Sb015253_Sorbi1    G A - - - - - - - - - - R H G D G A V D D G P L A - A G G A V P P S G A A G G D R - - - A G H D G A A D A D A H V G L M
Sb001867_Sorbi1    G A S G S N T A V Q H Q Q Q G D V - V Q R G - - - - - - - - - - - A A N A G G Y - - - - A G Y G G A P G - A A G M M M M
Sb032742_Sorbi1    A - - - - - - - - - - - K T G D G S I K K D A L G H V G G S S - - S A A Q G G D S K L T A K T G D G S I K K D A L G H V
 
AT4G14540.1     M G - - - - - - - - - - - - - - - - - - - - - - - - H Q F S H H F S - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb015253_Sorbi1    M G G A S S V V G F G A G G G - - - - - - - - - - - A A A S Y Y T A T - - - - - - - A A R K A Y G A G E G S T K V M E F
Sb001867_Sorbi1    M G Q P M - - - - Y G S P Q Q Q Q P P P P P P S Q Q Q Q Q Q H H M A M - - - - - - - G G R G G F G H Q G G G - - - - - -
Sb032742_Sorbi1    G G S S S A A Q G M G - - - - - - - - - - - - - - - Q Q G A Y N Q G M G Y M Q P Q M G Q Q G A Y N Q G M G Y - - - M Q P
 
AT4G14540.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb015253_Sorbi1    E G I A G E E E N G G V Q R - G R G F A N N H L H G A V Q W
Sb001867_Sorbi1    - G G G G S S S S S G L G R Q D R A - - - - - - - - - - - -
Sb032742_Sorbi1    Q Y H N G D I S N - - - - - - - - - - - - - - - - - - - - -
 
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