fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008970 not found in 167aa AT3G53340.1 not_not 0.673913043 III
Sb026432 not found in 215aa AT2G47810.1 not_not 0.590579710 III
Sb019135 not found in 135aa AT2G37060.3 not_not 0.576086956 III
Sb010924 not found in 276aa AT5G47670.2 not_not 0.543478260 III
Sb003445 not found in 273aa AT5G47670.1 not_not 0.471014492 III
Sb009278 not found in 146aa AT1G09030.1 not_not 0.456521739 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14540.1     -MAD------------SDND---SGGHKDGGNAS-------------TREQDRFLPIANV
Sb003445_Sorbi1 -MNPQSPKTSAPCTLPVEPA---AAVVPNEAVATDKAPPPPTANTVIIREQDRLMPVANV
Sb009278_Sorbi1 -MASSST---------TQDA---NNG---------------------VRHDNNLLPIANV
Sb010924_Sorbi1 -MDSSFLPAG------AESGSVVSGGANNGAAAQQQAPP-------LIREQDRLMPIANV
Sb019135_Sorbi1 -MSE------------AEAA---CGG---GGGG---------------KEQDRFLPIANI
Sb026432_Sorbi1 LKGPGGGVVGA-VHGGAEHE-MTGCGAGTGAGGR-------GGTRVVVSAWSGSAPARGC
Sb008970_Sorbi1 -MADD---GG-----SHEGG---GGG---GGGGG-------------YREQDRFLPIANI
                                 :                                 .   *  . 

AT4G14540.1     SRIMKKAL--------PANA---KISKDAKETVQECVS---------EFISFITGEASDK
Sb003445_Sorbi1 SRIMRQVL--------PPYA---KISDDAKEVIQECVS---------EFISFVTGEANER
Sb009278_Sorbi1 GRIMKDAL--------PPQA---KISKHAKETIQECAT---------EFVGFVTGEASER
Sb010924_Sorbi1 IRIMRRVL--------PAHA---KISDDAQETIQECVS---------EYISFITGEANER
Sb019135_Sorbi1 GRIMRRAV--------PENG---KIAKDSKESIQECVS---------EFISFITSEASDK
Sb026432_Sorbi1 GRGGAVALELAVLVEVPAHGVDVVVEAEGAEGPADVVAVDGLALLLVALVGCLAGDEADE
Sb008970_Sorbi1 SRIMKKAV--------PANG---KIAKDAKETLQECVS---------EFISFVTSEASDK
                 *    .:        *  .    :  .. *   : .:           :. ::.:  :.

AT4G14540.1     CQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEK--TTTAGRQGDKEGG-
Sb003445_Sorbi1 CHTERRKTVASEDIVWALNRLGFDDYVAPVGTFLQRMRESEA----------GGEERGP-
Sb009278_Sorbi1 CRRERRKTINGDDICHAMRSLGLDHYADSMHRYLQRYRETEELAA---------------
Sb010924_Sorbi1 CQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYRDFQGEARGVRLAPGAAPSRGGD
Sb019135_Sorbi1 CMKERRKTINGDDIIWSLGTLGFEEYVEPLKIYLKNYR--EGDTKGSKSSDQNGKKQ---
Sb026432_Sorbi1 L---------GDALLHRL--LGL--------------------------LGDLGVGRQD-
Sb008970_Sorbi1 CQKEKRKTINGDDLLWAMATLGFEEYVEPLKIYLQKYREMEGDSKLSTKAGEGSIKKDA-
                          .: :   :  **:                                     

AT4G14540.1     ------GGGGGAGSGSGG---------------APMYGG---------------------
Sb003445_Sorbi1 --------GRGGGSRRGSSVV---------TLTLPVNGGAQLTMHHPAAVSRHPHQG---
Sb009278_Sorbi1 ------TLNNGGGGRDGRAIQ------IDVRAELSIFKG---------------------
Sb010924_Sorbi1 HHHHHPLKSRGPGGGSGAAMLPHHHHHHDMQMHAAMYGGTVPPAPGP------PHHGHGH
Sb019135_Sorbi1 ------ILLNGEPASSFD------------------------------------------
Sb026432_Sorbi1 ------LLHDAADVGDGQQPV------LLLDLQVTPSSGAAAHQTRP------P------
Sb008970_Sorbi1 ------ISSHGGTSSSSNQLV-----------QHGVYNQ---------------------
                          .                                                 

AT4G14540.1     -----------------------------------------GMVTTMG------------
Sb003445_Sorbi1 ----VSPAAGYAVRPVPR---PAAVPSANGAVAAPHFGGR-SYQMYGGNHRPVVPCYHGG
Sb009278_Sorbi1 ------------------------------------------------------------
Sb010924_Sorbi1 GFLMPHPQGGSHYLPYPY---------------EPTYGGEHAMAAYYGGAAAYAPGNGGG
Sb019135_Sorbi1 -----------------------------------------GM-----------------
Sb026432_Sorbi1 --------------PVPVRRLPVEV-----------------------------------
Sb008970_Sorbi1 -----------------------------------------GMG-YMQ------------
                                                                            

AT4G14540.1     ------------------HQFSHHFS---------------------
Sb003445_Sorbi1 GGAAFVDAGGSQHVGFHDDEASSSTENPPAGRPGSH-----------
Sb009278_Sorbi1 -----------------SNQQDGRD----------------------
Sb010924_Sorbi1 SGDGSGSSGGSAS---HTPQGSGGFEHP---HPFAYK----------
Sb019135_Sorbi1 -----------------------------------------------
Sb026432_Sorbi1 -------VGHAAAVRRRRRRLPSPFSSP---RPPSLASSSDPLVCVS
Sb008970_Sorbi1 ------------------PQYHNGDT---------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     - M A D - - - - - - - - - - - - S D N D - - - S G G H K D G G N A S - - - - - - - - - - - - - T R E Q D R F L P I A N V
Sb003445_Sorbi1    - M N P Q S P K T S A P C T L P V E P A - - - A A V V P N E A V A T D K A P P P P T A N T V I I R E Q D R L M P V A N V
Sb009278_Sorbi1    - M A S S S T - - - - - - - - - T Q D A - - - N N G - - - - - - - - - - - - - - - - - - - - - V R H D N N L L P I A N V
Sb010924_Sorbi1    - M D S S F L P A G - - - - - - A E S G S V V S G G A N N G A A A Q Q Q A P P - - - - - - - L I R E Q D R L M P I A N V
Sb019135_Sorbi1    - M S E - - - - - - - - - - - - A E A A - - - C G G - - - G G G G - - - - - - - - - - - - - - - K E Q D R F L P I A N I
Sb026432_Sorbi1    L K G P G G G V V G A - V H G G A E H E - M T G C G A G T G A G G R - - - - - - - G G T R V V V S A W S G S A P A R G C
Sb008970_Sorbi1    - M A D D - - - G G - - - - - S H E G G - - - G G G - - - G G G G G - - - - - - - - - - - - - Y R E Q D R F L P I A N I
 
AT4G14540.1     S R I M K K A L - - - - - - - - P A N A - - - K I S K D A K E T V Q E C V S - - - - - - - - - E F I S F I T G E A S D K
Sb003445_Sorbi1    S R I M R Q V L - - - - - - - - P P Y A - - - K I S D D A K E V I Q E C V S - - - - - - - - - E F I S F V T G E A N E R
Sb009278_Sorbi1    G R I M K D A L - - - - - - - - P P Q A - - - K I S K H A K E T I Q E C A T - - - - - - - - - E F V G F V T G E A S E R
Sb010924_Sorbi1    I R I M R R V L - - - - - - - - P A H A - - - K I S D D A Q E T I Q E C V S - - - - - - - - - E Y I S F I T G E A N E R
Sb019135_Sorbi1    G R I M R R A V - - - - - - - - P E N G - - - K I A K D S K E S I Q E C V S - - - - - - - - - E F I S F I T S E A S D K
Sb026432_Sorbi1    G R G G A V A L E L A V L V E V P A H G V D V V V E A E G A E G P A D V V A V D G L A L L L V A L V G C L A G D E A D E
Sb008970_Sorbi1    S R I M K K A V - - - - - - - - P A N G - - - K I A K D A K E T L Q E C V S - - - - - - - - - E F I S F V T S E A S D K
 
AT4G14540.1     C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G E K - - T T T A G R Q G D K E G G -
Sb003445_Sorbi1    C H T E R R K T V A S E D I V W A L N R L G F D D Y V A P V G T F L Q R M R E S E A - - - - - - - - - - G G E E R G P -
Sb009278_Sorbi1    C R R E R R K T I N G D D I C H A M R S L G L D H Y A D S M H R Y L Q R Y R E T E E L A A - - - - - - - - - - - - - - -
Sb010924_Sorbi1    C Q R E Q R K T I T A E D V L W A M S R L G F D D Y V E P L S V Y L H R Y R D F Q G E A R G V R L A P G A A P S R G G D
Sb019135_Sorbi1    C M K E R R K T I N G D D I I W S L G T L G F E E Y V E P L K I Y L K N Y R - - E G D T K G S K S S D Q N G K K Q - - -
Sb026432_Sorbi1    L - - - - - - - - - G D A L L H R L - - L G L - - - - - - - - - - - - - - - - - - - - - - - - - - L G D L G V G R Q D -
Sb008970_Sorbi1    C Q K E K R K T I N G D D L L W A M A T L G F E E Y V E P L K I Y L Q K Y R E M E G D S K L S T K A G E G S I K K D A -
 
AT4G14540.1     - - - - - - G G G G G A G S G S G G - - - - - - - - - - - - - - - A P M Y G G - - - - - - - - - - - - - - - - - - - - -
Sb003445_Sorbi1    - - - - - - - - G R G G G S R R G S S V V - - - - - - - - - T L T L P V N G G A Q L T M H H P A A V S R H P H Q G - - -
Sb009278_Sorbi1    - - - - - - T L N N G G G G R D G R A I Q - - - - - - I D V R A E L S I F K G - - - - - - - - - - - - - - - - - - - - -
Sb010924_Sorbi1    H H H H H P L K S R G P G G G S G A A M L P H H H H H H D M Q M H A A M Y G G T V P P A P G P - - - - - - P H H G H G H
Sb019135_Sorbi1    - - - - - - I L L N G E P A S S F D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026432_Sorbi1    - - - - - - L L H D A A D V G D G Q Q P V - - - - - - L L L D L Q V T P S S G A A A H Q T R P - - - - - - P - - - - - -
Sb008970_Sorbi1    - - - - - - I S S H G G T S S S S N Q L V - - - - - - - - - - - Q H G V Y N Q - - - - - - - - - - - - - - - - - - - - -
 
AT4G14540.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M V T T M G - - - - - - - - - - - -
Sb003445_Sorbi1    - - - - V S P A A G Y A V R P V P R - - - P A A V P S A N G A V A A P H F G G R - S Y Q M Y G G N H R P V V P C Y H G G
Sb009278_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010924_Sorbi1    G F L M P H P Q G G S H Y L P Y P Y - - - - - - - - - - - - - - - E P T Y G G E H A M A A Y Y G G A A A Y A P G N G G G
Sb019135_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M - - - - - - - - - - - - - - - - -
Sb026432_Sorbi1    - - - - - - - - - - - - - - P V P V R R L P V E V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb008970_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M G - Y M Q - - - - - - - - - - - -
 
AT4G14540.1     - - - - - - - - - - - - - - - - - - H Q F S H H F S - - - - - - - - - - - - - - - - - - - - -
Sb003445_Sorbi1    G G A A F V D A G G S Q H V G F H D D E A S S S T E N P P A G R P G S H - - - - - - - - - - -
Sb009278_Sorbi1    - - - - - - - - - - - - - - - - - S N Q Q D G R D - - - - - - - - - - - - - - - - - - - - - -
Sb010924_Sorbi1    S G D G S G S S G G S A S - - - H T P Q G S G G F E H P - - - H P F A Y K - - - - - - - - - -
Sb019135_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026432_Sorbi1    - - - - - - - V G H A A A V R R R R R R L P S P F S S P - - - R P P S L A S S S D P L V C V S
Sb008970_Sorbi1    - - - - - - - - - - - - - - - - - - P Q Y H N G D T - - - - - - - - - - - - - - - - - - - - -
 
0