fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024092 not found in 365aa AT4G14540.1 1st_1st 0.746376811 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14540.1     ------------MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKD
Sb024092_Sorbi1 LDRTTLVGGWAAMPDSDNESGGPSNADFSSPREQDRFLPIANVSRIMKKALPANAKISKD
                            *.****:*** .:.. :*.*****************************

AT4G14540.1     AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKY
Sb024092_Sorbi1 AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIEPLKLYLHKF
                *************************************************:****:**:*:

AT4G14540.1     REVEGEKTTT--AG-----RQGDKE--------GGGG--------GGGAGSGSG-----G
Sb024092_Sorbi1 RELEGEKAATGVAGSSSGVSQPHRESTPSSAHNGAGGPVGGYGMYGGAGGGGSGMIMMMG
                **:****::*  **      * .:*        *.**        **..*.***     *

AT4G14540.1     APMYGGGMVTTMGH-QFSHHFS----------------------------
Sb024092_Sorbi1 QPMYGGSPPAASGYPQPPHHQMVMGGKGGAYGHGGGSSSSPSGLGRQDRL
                 *****.  :: *: * .**
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     - - - - - - - - - - - - M A D S D N D S G G H K D G G N A S T R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D
Sb024092_Sorbi1    L D R T T L V G G W A A M P D S D N E S G G P S N A D F S S P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D
 
AT4G14540.1     A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y
Sb024092_Sorbi1    A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y I E P L K L Y L H K F
 
AT4G14540.1     R E V E G E K T T T - - A G - - - - - R Q G D K E - - - - - - - - G G G G - - - - - - - - G G G A G S G S G - - - - - G
Sb024092_Sorbi1    R E L E G E K A A T G V A G S S S G V S Q P H R E S T P S S A H N G A G G P V G G Y G M Y G G A G G G G S G M I M M M G
 
AT4G14540.1     A P M Y G G G M V T T M G H - Q F S H H F S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024092_Sorbi1    Q P M Y G G S P P A A S G Y P Q P P H H Q M V M G G K G G A Y G H G G G S S S S P S G L G R Q D R L
 
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