fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023182 not found in 191aa AT5G47640.1 1st_not 0.764492753 II
Gm023734 not found in 177aa AT4G14540.1 not_1st 0.753623188 II
Gm041932 not found in 171aa AT4G14540.1 not_1st 0.753623188 II
Gm031085 not found in 108aa AT4G14540.1 not_1st 0.572463768 II
Gm012840 not found in 84aa AT4G14540.1 not_1st 0.547101449 II
Gm021297 not found in 81aa AT4G14540.1 not_1st 0.547101449 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14540.1     MADSDNDSGGHKDGGNAS-------TREQDRFLPIANVSRIMKKALPANAKISKDAKETV
gm021297_Glyma0 -----------------------------------------MKRALPANAKISKEAKETV
gm023734_Glyma0 MAESDNESGGHT--GNASGSNELSGCREQDRFLPIANVSRIMKKALPANAKISKEAKETV
gm031085_Glyma1 MADSDNDSDGAHNSGKGV---KLL-SREQDRFLPIANVSRIMKKTLPANVKISKYTKETV
gm012840_Glyma0 -----------------------------------------MKRALPANAKISKEAKETV
gm041932_Glyma1 MAESDNESGGHT--GNASGSNEFSGCREQDRFLPIANVSRIMKKALPANAKISKEAKETV
gm023182_Glyma0 MADSDNDSGGAHNGGKGS---EMS-PREQDRFLPIANVSRIMKKALPANAKISKDAKETV
                                                         **::****.**** :****

AT4G14540.1     QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEG
gm021297_Glyma0 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKLYLNNYRETEG
gm023734_Glyma0 QECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVDPLKIYLHKYREMEG
gm031085_Glyma1 QEYVSALISFIIDKASNKCQREKRKTINGDDLLWAMTTLGFEDYLEPLKGYL--------
gm012840_Glyma0 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKFYLNNYRETEG
gm041932_Glyma1 QECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLHKYRELEG
gm023182_Glyma0 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKGYLQRFREMEG
                ** ** :**** .:**:***:*********************:*: *** **        

AT4G14540.1     EKTTTAGRQGDKEGGGGGGG-------AGSGSGGA-PMYGGGMVTTMGHQFSHHFS----
gm021297_Glyma0 EK----------------------------------------------------------
gm023734_Glyma0 EKTAMMGRPHERDEGYG------------HGHGHATPM----MTMMMGHQPQHQHQHQHQ
gm031085_Glyma1 ------------------------------------------------------------
gm012840_Glyma0 EKSSM-------------------------------------------------------
gm041932_Glyma1 EKTAMMGRPHERDEGY----------------GHATPM----M-IMMGHQ-----QQQHQ
gm023182_Glyma0 EKTVAA---RDKDAPPLTNATNSAYESANYAAAAAVPG------GIMMHQ----------
                                                                            

AT4G14540.1     ----------------------------------
gm021297_Glyma0 ----------------------------------
gm023734_Glyma0 GHVYGS------------------GSASSA-RTR
gm031085_Glyma1 ----------------------------------
gm012840_Glyma0 ----------------------------------
gm041932_Glyma1 GHVYGSG--------------TTTGSASSA-RTR
gm023182_Glyma0 GHVYGSAGFHQVAGGAIKGGPAYPGPGSNAGRPR
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     M A D S D N D S G G H K D G G N A S - - - - - - - T R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V
gm021297_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K R A L P A N A K I S K E A K E T V
gm023734_Glyma0    M A E S D N E S G G H T - - G N A S G S N E L S G C R E Q D R F L P I A N V S R I M K K A L P A N A K I S K E A K E T V
gm031085_Glyma1    M A D S D N D S D G A H N S G K G V - - - K L L - S R E Q D R F L P I A N V S R I M K K T L P A N V K I S K Y T K E T V
gm012840_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K R A L P A N A K I S K E A K E T V
gm041932_Glyma1    M A E S D N E S G G H T - - G N A S G S N E F S G C R E Q D R F L P I A N V S R I M K K A L P A N A K I S K E A K E T V
gm023182_Glyma0    M A D S D N D S G G A H N G G K G S - - - E M S - P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V
 
AT4G14540.1     Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q K Y R E V E G
gm021297_Glyma0    Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E N Y V G P L K L Y L N N Y R E T E G
gm023734_Glyma0    Q E C V S E F I S F I T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E D Y V D P L K I Y L H K Y R E M E G
gm031085_Glyma1    Q E Y V S A L I S F I I D K A S N K C Q R E K R K T I N G D D L L W A M T T L G F E D Y L E P L K G Y L - - - - - - - -
gm012840_Glyma0    Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E N Y V G P L K F Y L N N Y R E T E G
gm041932_Glyma1    Q E C V S E F I S F I T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E E Y V E P L K V Y L H K Y R E L E G
gm023182_Glyma0    Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K G Y L Q R F R E M E G
 
AT4G14540.1     E K T T T A G R Q G D K E G G G G G G G - - - - - - - A G S G S G G A - P M Y G G G M V T T M G H Q F S H H F S - - - -
gm021297_Glyma0    E K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023734_Glyma0    E K T A M M G R P H E R D E G Y G - - - - - - - - - - - - H G H G H A T P M - - - - M T M M M G H Q P Q H Q H Q H Q H Q
gm031085_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm012840_Glyma0    E K S S M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm041932_Glyma1    E K T A M M G R P H E R D E G Y - - - - - - - - - - - - - - - - G H A T P M - - - - M - I M M G H Q - - - - - Q Q Q H Q
gm023182_Glyma0    E K T V A A - - - R D K D A P P L T N A T N S A Y E S A N Y A A A A A V P G - - - - - - G I M M H Q - - - - - - - - - -
 
AT4G14540.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm021297_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023734_Glyma0    G H V Y G S - - - - - - - - - - - - - - - - - - G S A S S A - R T R
gm031085_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm012840_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm041932_Glyma1    G H V Y G S G - - - - - - - - - - - - - - T T T G S A S S A - R T R
gm023182_Glyma0    G H V Y G S A G F H Q V A G G A I K G G P A Y P G P G S N A G R P R
 
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