fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14550.1 NLKETELCLGLPGGTE at 6/228 in AT4G14550.1
FSETVDLKLNLQSNKQ at 37/228 in AT4G14550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033721 NYKETELCLGLPGAVG in 20/277 AT4G14550.1 not_1st 0.709677419 II
FAETVDLKLNLQAKEG in 52/277
Pt001264 RFEETELRLGLPGNGG in 15/237 AT4G14550.1 not_1st 0.663594470 II
FSETVDLKLNLSSKEG in 44/237
Pt039463 GFEETELRLGLPGNGG in 15/237 AT4G14550.1 not_1st 0.652073732 II
FSETVDLKLKLSSKES in 42/237
Pt001265 RFEETELRLGLPGNGG in 15/229 AT4G14550.1 not_1st 0.617511520 II
FSETVDLKLNLSSKEG in 44/229
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14550.1     -------------MNLKETELCLGLPGGT---ETVESPAKSGVGNKRGFSETVDLKLNLQ
pt001265_POPTR_ MEVEK--GTK---MRFEETELRLGLPGNGGGGTE-----GGEFARKRGFSETVDLKLNLS
pt001264_POPTR_ MEVEK--GTK---MRFEETELRLGLPGNGGGGTE-----GGEFARKRGFSETVDLKLNLS
pt033721_POPTR_ MATATVLGTEMADLNYKETELCLGLPGAVGVKNEVETPNKA--TGKRGFAETVDLKLNLQ
pt039463_POPTR_ MEVEK--GTK---MGFEETELRLGLPGNGGGAE-------GEMVRKRGFSETVDLKLKLS
                             :  :**** *****             .    ****:*******:*.

AT4G14550.1     SNKQGHVDLN---TNGAPKEKTFL-----KDPSKPPAKAQVVGWPPVRNYRKNVMANQKS
pt001265_POPTR_ S-KEGGIDPNHEKT---QREKNLLA----TDPAKPPAKAQVVGWPPVRSFRKNMLAVQKS
pt001264_POPTR_ S-KEGGIDPNHEKT---QREKNLLA----TDPAKPPAKAQVVGWPPVRSFRKNMLAVQKS
pt033721_POPTR_ A-KEGVMDLNENIKNIASKDKNHLPADTIKDPAKPPAKAQVVGWPPVRSYRKNVLAQKNA
pt039463_POPTR_ S-KESGADPNHEKTSSLQREKNLLA----TDPAKPPAKAQVVGWPPVRSFRKNMLAVQKS
                : *:.  * *   .    ::*. *     .**:***************.:***::* :::

AT4G14550.1     GE--------------------------AEEA--MSSGGGTVAFVKVSMDGAPYLRKVDL
pt001265_POPTR_ ST--------------------------DQES-TDKVPGGNATFVKVSMDGAPYLRKVDL
pt001264_POPTR_ ST--------------------------DQES-TDKVPGGNATFVKVSMDGAPYLRKVDL
pt033721_POPTR_ SEEGFRAQVVGWPPLRSYRKNVLTQKNASEEGDKASTGGSSAAFVKVCMDGAPYLRKVDL
pt039463_POPTR_ ST--------------------------DQE--CEKVPGGNATFVKVSMDGAPYLRKVDL
                .                            :*    .  *...:****.************

AT4G14550.1     KMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWM
pt001265_POPTR_ KMYKTYHELSDALGKMFSSFTIGNCGSHGMKDFLNESKLIDLLNGTDYVPTYEDKDGDWM
pt001264_POPTR_ KMYKTYHELSDALGKMFSSFTIGNCGSHGMKDFLNESKLIDLLNGTDYVPTYEDKDGDWM
pt033721_POPTR_ KMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPSYEDKDGDWM
pt039463_POPTR_ KMYKTYQELSDALGKMFSSFTIGNCGSHGLKDFLNESKLIDLLNGTDYVPTYEDKDGDWM
                ***.:*::*****.*******:*. *::*: **:****::****.::***:*********

AT4G14550.1     LVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS--
pt001265_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLGNEYTA--------
pt001264_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLAPRAMEKCKNRSFK
pt033721_POPTR_ LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRT--
pt039463_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLAPRAMEKCKNRSYK
                ******* ***:**********:** **. .
BoxShade v3.31 C (beta, 970507) Output
AT4G14550.1     - - - - - - - - - - - - - M N L K E T E L C L G L P G G T - - - E T V E S P A K S G V G N K R G F S E T V D L K L N L Q
pt001265_POPTR_    M E V E K - - G T K - - - M R F E E T E L R L G L P G N G G G G T E - - - - - G G E F A R K R G F S E T V D L K L N L S
pt001264_POPTR_    M E V E K - - G T K - - - M R F E E T E L R L G L P G N G G G G T E - - - - - G G E F A R K R G F S E T V D L K L N L S
pt033721_POPTR_    M A T A T V L G T E M A D L N Y K E T E L C L G L P G A V G V K N E V E T P N K A - - T G K R G F A E T V D L K L N L Q
pt039463_POPTR_    M E V E K - - G T K - - - M G F E E T E L R L G L P G N G G G A E - - - - - - - G E M V R K R G F S E T V D L K L K L S
 
AT4G14550.1     S N K Q G H V D L N - - - T N G A P K E K T F L - - - - - K D P S K P P A K A Q V V G W P P V R N Y R K N V M A N Q K S
pt001265_POPTR_    S - K E G G I D P N H E K T - - - Q R E K N L L A - - - - T D P A K P P A K A Q V V G W P P V R S F R K N M L A V Q K S
pt001264_POPTR_    S - K E G G I D P N H E K T - - - Q R E K N L L A - - - - T D P A K P P A K A Q V V G W P P V R S F R K N M L A V Q K S
pt033721_POPTR_    A - K E G V M D L N E N I K N I A S K D K N H L P A D T I K D P A K P P A K A Q V V G W P P V R S Y R K N V L A Q K N A
pt039463_POPTR_    S - K E S G A D P N H E K T S S L Q R E K N L L A - - - - T D P A K P P A K A Q V V G W P P V R S F R K N M L A V Q K S
 
AT4G14550.1     G E - - - - - - - - - - - - - - - - - - - - - - - - - - A E E A - - M S S G G G T V A F V K V S M D G A P Y L R K V D L
pt001265_POPTR_    S T - - - - - - - - - - - - - - - - - - - - - - - - - - D Q E S - T D K V P G G N A T F V K V S M D G A P Y L R K V D L
pt001264_POPTR_    S T - - - - - - - - - - - - - - - - - - - - - - - - - - D Q E S - T D K V P G G N A T F V K V S M D G A P Y L R K V D L
pt033721_POPTR_    S E E G F R A Q V V G W P P L R S Y R K N V L T Q K N A S E E G D K A S T G G S S A A F V K V C M D G A P Y L R K V D L
pt039463_POPTR_    S T - - - - - - - - - - - - - - - - - - - - - - - - - - D Q E - - C E K V P G G N A T F V K V S M D G A P Y L R K V D L
 
AT4G14550.1     K M Y T S Y K D L S D A L A K M F S S F T M G S Y G A Q G M I D F M N E S K V M D L L N S S E Y V P S Y E D K D G D W M
pt001265_POPTR_    K M Y K T Y H E L S D A L G K M F S S F T I G N C G S H G M K D F L N E S K L I D L L N G T D Y V P T Y E D K D G D W M
pt001264_POPTR_    K M Y K T Y H E L S D A L G K M F S S F T I G N C G S H G M K D F L N E S K L I D L L N G T D Y V P T Y E D K D G D W M
pt033721_POPTR_    K M Y K S Y Q E L S D A L A K M F S S F T M G N Y G A Q G M I D F M N E S K L M D L L N S S E Y V P S Y E D K D G D W M
pt039463_POPTR_    K M Y K T Y Q E L S D A L G K M F S S F T I G N C G S H G L K D F L N E S K L I D L L N G T D Y V P T Y E D K D G D W M
 
AT4G14550.1     L V G D V P W P M F V E S C K R L R I M K G S E A I G L A P R A M E K F K N R S - -
pt001265_POPTR_    L V G D V P W D M F V E S C K R L R I M K G T E A T G L G N E Y T A - - - - - - - -
pt001264_POPTR_    L V G D V P W D M F V E S C K R L R I M K G T E A T G L A P R A M E K C K N R S F K
pt033721_POPTR_    L V G D V P W E M F V D S C K R L R I M K G S E A I G L A P R A M E K C K S R T - -
pt039463_POPTR_    L V G D V P W D M F V E S C K R L R I M K G T E A T G L A P R A M E K C K N R S Y K
 
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