|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Get sequence file Get alignment file Get formatted file made by BOXSHADE Sequence file prepared (0 sec required). Alignment has started. CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475) AT4G14550.1 ------------------------------------------------------------ pt030401_POPTR_ MYSIP--------------------------------KEHDYIGL-SETPSMENISEKLS pt042254_POPTR_ -------------------------------------------MT-TSVLGTE------- pt001264_POPTR_ ---------------------------------------------------ME------- pt001265_POPTR_ ---------------------------------------------------ME------- pt015737_POPTR_ --------------------------------------------M-TSIMGAE------- pt039771_POPTR_ -MSPPLLGVVEEEGHSNVTLLASPASAESACLNGLELKERNYMGL-SDCSSVDS------ pt011954_POPTR_ MSSIP--------------------------------KEHDYIGL-SETPSMEKISDKLS pt040947_POPTR_ ---------------------------------------------------MEG------ pt005605_POPTR_ -MSMP--------------------------------LEHDYIGISSEVSSMENTSG--- pt033721_POPTR_ ------------------------------------------MAT-ATVLGTE------- pt028468_POPTR_ -------------------------------------------------MSPENGSNLL- pt002787_POPTR_ ------------------------------------------------------------ pt002101_POPTR_ --------------------------------------------M-TSIMGAET------ pt039463_POPTR_ ---------------------------------------------------ME------- AT4G14550.1 --------------------------------MNLKETELCLGLPGGT---ETVESPAKS pt030401_POPTR_ SSSTSSSTLSTEEKNNSSSSNSNNNNKNNNTSLNMKETELRLGLPGS-------QSPERK pt042254_POPTR_ -----------------------------RTDLNYKETELCLGLPGAVGAKNEVETPNKA pt001264_POPTR_ --------------------------VEKGTKMRFEETELRLGLPGNGGGGTEGGEFAR- pt001265_POPTR_ --------------------------VEKGTKMRFEETELRLGLPGNGGGGTEGGEFAR- pt015737_POPTR_ --------------------------PEKYSMINFEETELRLGLPGGIGNGND-GEVAKS pt039771_POPTR_ -------------------SAVSAASDERKTSLNLKATELRLGLPGS-------QSPERN pt011954_POPTR_ S---SSSTLSTEENIN---SNSNSNSNSTNTSLNLKETELRLGLPGY-------QSPERK pt040947_POPTR_ -------------------------GVAYENDLNLKETELRLGLPGT-------GCTNEK pt005605_POPTR_ -------------------TDTINISTTASKGLNLKATELRLGLPGS-------DSPERG pt033721_POPTR_ -----------------------------MADLNYKETELCLGLPGAVGVKNEVETPNKA pt028468_POPTR_ --------------------------ESDAANVSFKETELTLGLPGE------------- pt002787_POPTR_ --------------------------MAYESDLNLKATELRLGLPGS-------DEPEKP pt002101_POPTR_ --------------------------ADTYSMINYEETELRLGLPGGASNGND-GEAAKG pt039463_POPTR_ --------------------------VEKGTKMGFEETELRLGLPGNGGGAE--GEMVR- : : *** ***** AT4G14550.1 G-----------------------------------VGNKRGFSETVD------------ pt030401_POPTR_ PTVPAAGVSLVGKD----IDTNNTNAYSLIPVKNLVSGAKRVFSDAIDGSTGKWVFSG-- pt042254_POPTR_ -------------------------------------TGKRGFAETVD------------ pt001264_POPTR_ ---------------------------------------KRGFSETVD------------ pt001265_POPTR_ ---------------------------------------KRGFSETVD------------ pt015737_POPTR_ -------------------------------------NGKRGFSETVD------------ pt039771_POPTR_ HELSLLSSALLDEKPFFPLHPSNDGHYSSTQ-KNVVSGNKRVFSDAMDEFSESKFLSN-- pt011954_POPTR_ LTLPAAGVSLFGKD----IDTNNTNGYPLRPLKNLVSGTKRGFSDAIVGSSGKWVFSGSN pt040947_POPTR_ GVS-------------------------------GARNNKRPFPETREEGG--------- pt005605_POPTR_ NENQQLGFSL-----------NNNNSKD----KSFVSGARRGFSVAIHGGSANWVFSGNA pt033721_POPTR_ -------------------------------------TGKRGFAETVD------------ pt028468_POPTR_ ----SRGLALIEK-----------------------TSGKRGFLETVD------------ pt002787_POPTR_ STTP------------------------------SVRSNKRASPEISEESR--------- pt002101_POPTR_ -------------------------------------NGKRGFSETVD------------ pt039463_POPTR_ ---------------------------------------KRGFSETVD------------ :* AT4G14550.1 -LKLN-------LQSN----------------------------KQGHVDLN---TNGAP pt030401_POPTR_ -------------------------------GDNGNPQKSRVAGPAKK-DVAQSPKP-VQ pt042254_POPTR_ -LKLN-------LQA-----------------------------KEGVMDLNENIKNITS pt001264_POPTR_ -LKLN-------LSSK----------------------------EGGI-DPNHEKT---Q pt001265_POPTR_ -LKLN-------LSSK----------------------------EGGI-DPNHEKT---Q pt015737_POPTR_ -LKLN-------LSTK----------------------------ESGK-GGDEEK---VM pt039771_POPTR_ -SEVN-----AMLSPRPSPNMGLKPGMLENLGVQQAKVKEIVAPKAGQE------RPHAA pt011954_POPTR_ GSEVDLGKGAILFSPR---------------GDNGNSQKSCVAGPAKKDDVAQSPKP-VQ pt040947_POPTR_ --------------------------------------------ANGKSDAQH------- pt005605_POPTR_ GSDPN-------FSLR---------------GAN-----------SGKEGFPHSSKPVVQ pt033721_POPTR_ -LKLN-------LQA-----------------------------KEGVMDLNENIKNIAS pt028468_POPTR_ -LNLG---------------------------------------RSSNVDSDHNKY--SG pt002787_POPTR_ --------------------------------------------SKGSSSVSSN------ pt002101_POPTR_ -LKLN-------LSTK----------------------------ETGKDGSDQEKV--VM pt039463_POPTR_ -LKLK-------LSSK----------------------------ESGA-DPNHEKTSSLQ AT4G14550.1 KEKTFL-----K-DPSKP---------PAKAQVVGWPPVRNYRKNVMA------------ pt030401_POPTR_ EKNSQVAAANEN--SSAP---------AAKTQVVGWPPIRSFRKNTMA------------ pt042254_POPTR_ KDKNHLPAVTIK-DPAKP---------PAKAQVVGWPPVRSYRKNVMA------------ pt001264_POPTR_ REKNLL----AT-DPAKP---------PAKAQVVGWPPVRSFRKNMLA------------ pt001265_POPTR_ REKNLL----AT-DPAKP---------PAKAQVVGWPPVRSFRKNMLA------------ pt015737_POPTR_ KEKTVAP-PAST-DPAKP---------PAKAQVVGWPPIRSFRKNVMA------------ pt039771_POPTR_ NETRPLRNSSAN-NSSAP---------APKAQVVGWPPIKSFRKNSLA------------ pt011954_POPTR_ EKISQVAAANEN--SSAP---------AAKAQVVGWPPIRSFRKNTMA------------ pt040947_POPTR_ --------DDQE-TASAPNTYSFDMHATCRVQIVGWPPIRSYRKNSLQ------------ pt005605_POPTR_ ENKSQVDGANTNGHGAAP---------ASKAQVVGWPPIRSFRKNTMA------------ pt033721_POPTR_ KDKNHLPADTIK-DPAKP---------PAKAQVVGWPPVRSYRKNVLAQKNASEEGFRAQ pt028468_POPTR_ ESETDVP------NTAKP--------PAAKAQVVGWPPVRAYRKNAMK------------ pt002787_POPTR_ -------VENGE-RDSAP---------PAKAQVVGWPPIRSYRKNCLQ------------ pt002101_POPTR_ KEKTVA--PRPN-DPAKP---------PSKAQVVGWPPIRSFRKNVMA------------ pt039463_POPTR_ REKNLL----AT-DPAKP---------PAKAQVVGWPPVRSFRKNMLA------------ : * . :.*:*****:: :*** : AT4G14550.1 ----------------NQKSGEAEEAMSSGGG--TVAFVKVSMDGAPYLRKVDLKMYTSY pt030401_POPTR_ ----------------SSLAKNNEDVDGKSGY--GYLYVKVSMDGAPYLRKVDLKTYGNY pt042254_POPTR_ ----------------QKNASEEGEKASTGGS--SAAFVKVCMDGAPYLRKVDLKMYRSY pt001264_POPTR_ ---------------VQKSSTDQESTDKVPGG--NATFVKVSMDGAPYLRKVDLKMYKTY pt001265_POPTR_ ---------------VQKSSTDQESTDKVPGG--NATFVKVSMDGAPYLRKVDLKMYKTY pt015737_POPTR_ ---------------VQKNSNDNGEKSGSSGT--GVAFVKVSMDGAPYLRKVDLKLYKSY pt039771_POPTR_ ----------------TT-SKNTEEVDGKAGP--GALFIKVSMDGAPYLRKVDLRNYSAY pt011954_POPTR_ ----------------SSLVKNNEDVEGKSGY--GCLYVKVSMDGAPYLRKVDLKTYSNY pt040947_POPTR_ -------------------PKKAEDEAA------AGMYVKVSMDGAPYLRKIDLKVYKGY pt005605_POPTR_ ----------------SHLSKNDDGAEVKSGS--GCLYVKVSMDGAPYLRKVDLKTFGSY pt033721_POPTR_ VVGWPPLRSYRKNVLTQKNASEEGDKASTGGS--SAAFVKVCMDGAPYLRKVDLKMYKSY pt028468_POPTR_ ----------------------------------SCKYVKVAVDGAPYLRKVDLEMYNSY pt002787_POPTR_ -------------------PKKNDQVDG------AGMYVKVSVDGAPYLRKIDLKVYKSY pt002101_POPTR_ ---------------VQKNSNDEGEKASSSGTTGTAAFVKVSMDGAPYLRKVDLKLYKSY pt039463_POPTR_ ---------------VQKSSTDQE-CEKVPGG--NATFVKVSMDGAPYLRKVDLKMYKTY ::**.:********:**. : * AT4G14550.1 KDLSDALAKMFSS--FTMGSYGAQGM--IDFMNESKVMD--LLNSSEYVPSYEDKDGDWM pt030401_POPTR_ LELSSALEKMFGC--FTIGQCGSHGLAARDGLTESCLKD---LHGSEYVLTFEDKDGDWM pt042254_POPTR_ QELSDALAKMFSS--FTMGNYGAQGM--IDFMNESKLMD--LLNSSEYVPSYEDKDGDWM pt001264_POPTR_ HELSDALGKMFSS--FTIGNCGSHGM--KDFLNESKLID--LLNGTDYVPTYEDKDGDWM pt001265_POPTR_ HELSDALGKMFSS--FTIGNCGSHGM--KDFLNESKLID--LLNGTDYVPTYEDKDGDWM pt015737_POPTR_ QELSDALGKMFSS--FTIGNCGSQGM--KDFMNESKLID--LLNGSDYVPTYEDKDGDWM pt039771_POPTR_ QELSSALEKMFSC--FTIGQYGSHGAPGREMLSESKLKD--LLHGSEYVLTYEDKDGDWM pt011954_POPTR_ LELSSALEKMFSC--FTIGQCGSHGLRGQDGLTESRLKD--ILHGSEYVLTYEDKDGDWM pt040947_POPTR_ PELLKALENMFK---LTIGEYSEREG----------------YKGSEYAPTYEDKDGDWM pt005605_POPTR_ MELSSALEKMFSC--FTIGQCGSHVVPGQDGLSESRLMD--LLHGSEYVLTYEDKDNDWM pt033721_POPTR_ QELSDALAKMFSS--FTMGNYGAQGM--IDFMNESKLMD--LLNSSEYVPSYEDKDGDWM pt028468_POPTR_ QQLLNALQDMFSCFSFTI----------RNYLNERTIMEQEVNNGVEYVPTYEDKDGDWM pt002787_POPTR_ PELLKALENMFK---LTIGEYSENEG----------------YNGSEFAPTYEDKDGDWM pt002101_POPTR_ RELSDALGKMFSS--FTIGNCGSQGT--KDFMNESKLID--LLNSSEYVPTYEDKDGDWM pt039463_POPTR_ QELSDALGKMFSS--FTIGNCGSHGL--KDFLNESKLID--LLNGTDYVPTYEDKDGDWM :* .** .** :*: :. ::. ::****.*** AT4G14550.1 LVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS-- pt030401_POPTR_ LVGDVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKNRN-- pt042254_POPTR_ LVGDVPWEMFVNSCKRLRIMKGSEAIGLAPRAMEKCKSRT-- pt001264_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLAPRAMEKCKNRSFK pt001265_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLGNEYTA-------- pt015737_POPTR_ LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRI-- pt039771_POPTR_ LVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAMEKCKNRN-- pt011954_POPTR_ LVGDVPWDMFTNSCRRLRIMKGSEAIGLAPRAMEKCKNRN-- pt040947_POPTR_ LVGDVPWDMFLSSCKKLRIMKGSEAIGLGCGA---------- pt005605_POPTR_ LVGDVPWKMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN-- pt033721_POPTR_ LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRT-- pt028468_POPTR_ MLGDVPWKMFVESCKRLRLMKSSEATGFAPRTPSKCSSSS-- pt002787_POPTR_ LVGDVPWDMFISSCKRLRIMKGSEARGLGC------------ pt002101_POPTR_ LVGDVPWGMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS-- pt039463_POPTR_ LVGDVPWDMFVESCKRLRIMKGTEATGLAPRAMEKCKNRSYK ::***** ** .:*::**:**.::* *:.
|