fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14550.1 NLKETELCLGLPGGTE at 6/228 in AT4G14550.1
FSETVDLKLNLQSNKQ at 37/228 in AT4G14550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041779 AFEATELRLGLPGGGG in 11/277 AT3G23050.1 1st_not 0.571428571 II
FAETIDLKLKLEPAAA in 44/277
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14550.1     ----MNLKETELCLGLPGG---TETVESPAKSGVGNKRGFSETVDLKLNLQ---------
Os041779_Os12t0 MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSG-KRGFAETIDLKLKLEPAAAAVDDD
                    : :: *** ******    ::. :.*:*. * ****:**:****:*:         

AT4G14550.1     --------SNKQGHVDL----NTNGAPKEK----------------TFLKDPSKPPA-KA
Os041779_Os12t0 DDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKA
                        .::: :**:    * :.:*                   *   **.** * **

AT4G14550.1     QVVGWPPVRNYRKNVMANQKSGEAEEAMSSGG-------GTVAFVKVSMDGAPYLRKVDL
Os041779_Os12t0 QVVGWPPVRSYRKNILAVQ-ADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDL
                *********.****::* * :.:.::* ..**       .:.******************

AT4G14550.1     KMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWM
Os041779_Os12t0 KMYKSYLELSKALEKMFSSFTIGNCGSHG-VNGMNESKIADLLNGSEYVPTYEDKDGDWM
                ***.** :**.** *******:*. *::* :: *****: ****.*****:*********

AT4G14550.1     LVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS
Os041779_Os12t0 LVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS
                ******* *************************** ****
BoxShade v3.31 C (beta, 970507) Output
AT4G14550.1     - - - - M N L K E T E L C L G L P G G - - - T E T V E S P A K S G V G N K R G F S E T V D L K L N L Q - - - - - - - - -
Os041779_Os12t0    M A A D L A F E A T E L R L G L P G G G G D G D A A A A A A R S S S G - K R G F A E T I D L K L K L E P A A A A V D D D
 
AT4G14550.1     - - - - - - - - S N K Q G H V D L - - - - N T N G A P K E K - - - - - - - - - - - - - - - - T F L K D P S K P P A - K A
Os041779_Os12t0    D D K E E A A A D D R E K K V D I V G A D N D D A S P P A A A A A G G M K R S P S Q S S V V T A A A D P E K P R A P K A
 
AT4G14550.1     Q V V G W P P V R N Y R K N V M A N Q K S G E A E E A M S S G G - - - - - - - G T V A F V K V S M D G A P Y L R K V D L
Os041779_Os12t0    Q V V G W P P V R S Y R K N I L A V Q - A D K G K D A A D G G G D K S G A G A A A A A F V K V S M D G A P Y L R K V D L
 
AT4G14550.1     K M Y T S Y K D L S D A L A K M F S S F T M G S Y G A Q G M I D F M N E S K V M D L L N S S E Y V P S Y E D K D G D W M
Os041779_Os12t0    K M Y K S Y L E L S K A L E K M F S S F T I G N C G S H G - V N G M N E S K I A D L L N G S E Y V P T Y E D K D G D W M
 
AT4G14550.1     L V G D V P W P M F V E S C K R L R I M K G S E A I G L A P R A M E K F K N R S
Os041779_Os12t0    L V G D V P W E M F V E S C K R L R I M K G S E A I G L A P R A M E K C K N R S
 
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