fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14550.1 NLKETELCLGLPGGTE at 6/228 in AT4G14550.1
FSETVDLKLNLQSNKQ at 37/228 in AT4G14550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.580645161 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14550.1     MNLKETELCLGLP--------------------GGTETVES--------PAKSGVGNKRG
Sb031861_Sorbi1 --LDEH-----LPRHVADEHPVAVLVLVGRHVLGAVEQIHQLALVHAVHPLRPTASNGEG
                  *.*      **                    *..* :..        * :. ..* .*

AT4G14550.1     -----------FSETVDLKLNLQSNKQ---------------------------------
Sb031861_Sorbi1 AEHLLERLGQLLVALVHLEVHLAQVRRAVQAHLHERRTTASCRRRRGLVGVFAAAGALVG
                           :   *.*:::* . ::                                 

AT4G14550.1     --GH-------------------------VDLNTNGAPKEKTFLKDPSKPPAKAQVVGWP
Sb031861_Sorbi1 LHGHDVLPERPDRWPSHHLSLGGARLLGGVSLHGGGG-DDAALARGPLHLPADGGLL---
                  **                         *.*: .*. .: :: :.* : **.. ::   

AT4G14550.1     PVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPY---LRKVDLKMYTSYKDLS
Sb031861_Sorbi1 -------------RGGHAAGVFLGGGNTVLML-VRLRRLQYGRGSRRLQLQLEV------
                             :.*.*  .: .**.** :: * :    *    *:::*:: .      

AT4G14550.1     DAL-----------AKMFSSFTMGSYG-AQGMIDFMNESKVMDLLNSSEYVPSYEDKDGD
Sb031861_Sorbi1 DGLCEAPLPGGDDRAPPFADHLSPAAGQAQTELRLLEPQVRRRHCCCRRHWPSSSPLGSR
                *.*           *  *:..   : * **  : ::: .       . .: ** .  .. 

AT4G14550.1     WMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS---------
Sb031861_Sorbi1 LLLL-----PCFCFVCFALLASQDEEAGWLCKCKGGGFANARGLGRGATTT
                 :*:     * *   *  *   :..**  *.      * *
BoxShade v3.31 C (beta, 970507) Output
AT4G14550.1     M N L K E T E L C L G L P - - - - - - - - - - - - - - - - - - - - G G T E T V E S - - - - - - - - P A K S G V G N K R G
Sb031861_Sorbi1    - - L D E H - - - - - L P R H V A D E H P V A V L V L V G R H V L G A V E Q I H Q L A L V H A V H P L R P T A S N G E G
 
AT4G14550.1     - - - - - - - - - - - F S E T V D L K L N L Q S N K Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    A E H L L E R L G Q L L V A L V H L E V H L A Q V R R A V Q A H L H E R R T T A S C R R R R G L V G V F A A A G A L V G
 
AT4G14550.1     - - G H - - - - - - - - - - - - - - - - - - - - - - - - - V D L N T N G A P K E K T F L K D P S K P P A K A Q V V G W P
Sb031861_Sorbi1    L H G H D V L P E R P D R W P S H H L S L G G A R L L G G V S L H G G G G - D D A A L A R G P L H L P A D G G L L - - -
 
AT4G14550.1     P V R N Y R K N V M A N Q K S G E A E E A M S S G G G T V A F V K V S M D G A P Y - - - L R K V D L K M Y T S Y K D L S
Sb031861_Sorbi1    - - - - - - - - - - - - - R G G H A A G V F L G G G N T V L M L - V R L R R L Q Y G R G S R R L Q L Q L E V - - - - - -
 
AT4G14550.1     D A L - - - - - - - - - - - A K M F S S F T M G S Y G - A Q G M I D F M N E S K V M D L L N S S E Y V P S Y E D K D G D
Sb031861_Sorbi1    D G L C E A P L P G G D D R A P P F A D H L S P A A G Q A Q T E L R L L E P Q V R R R H C C C R R H W P S S S P L G S R
 
AT4G14550.1     W M L V G D V P W P M F V E S C K R L R I M K G S E A I G L A P R A M E K F K N R S - - - - - - - - -
Sb031861_Sorbi1    L L L L - - - - - P C F C F V C F A L L A S Q D E E A G W L C K C K G G G F A N A R G L G R G A T T T
 
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