fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14550.1 NLKETELCLGLPGGTE at 6/228 in AT4G14550.1
FSETVDLKLNLQSNKQ at 37/228 in AT4G14550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_not 0.516129032 III
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_not 0.493087557 III
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.453917050 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14550.1     ---------------------MNLKE------------------TELCLGLPGGTET---
Sb020598_Sorbi1 -GGPRVRGD------------RAPAR--------PAR-------RQRRRGCRGGEEAGFR
Sb033829_Sorbi1 ---------------------MAPPQEQDYIGLSPAAAAA----TELRLGLPGTEEA---
Sb020260_Sorbi1 RGGAQGERDNDGRDRLASNQLLAPAEPK------PMAGADVDVGTELRLGLPGGG-----
                                         .                   :   *  *       

AT4G14550.1     --VESPAKSGV----------GN----------------KRGFSETVDLKLNLQSN----
Sb020598_Sorbi1 GDHRPQAEAGA--------AGGAALGEGGGGWRWRRRRPRRGPTVVA-------SSSQHR
Sb033829_Sorbi1 --DGGEAAAGTPLTLELLPKGGA----------------KRGFTDAI-------------
Sb020260_Sorbi1 ------AEAAK----------AA----------------KRGFEDTIDLKLKLPTAG---
                      * :.           .                 :**   .              

AT4G14550.1     --KQGHVDLNTNGAPKEKTFLKDPS------KP----------PA-KAQVVGWPPVRNYR
Sb020598_Sorbi1 RRRYGHEEVAEPEQRGHRRRAAGPR---KASRPQGTGGGLAARPVVPQEHPGRPIPEKWR
Sb033829_Sorbi1 --------VRREAAARGKAPAEDEEVDKKKTQA----------PAAKAQVVGWPPIRSYR
Sb020260_Sorbi1 -MEEAAAAKPEPAAEKAKRPAEAPAAD--AEKP----------PAPKAQAVGWPPVRSYR
                                 :             :.          *.   :  * *  ..:*

AT4G14550.1     KNVMANQ----KSGEAEE-------AMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKD
Sb020598_Sorbi1 RRQGQRRQ-DVTGVREGE-HGRRAVPAQGGPEDVRELPGAVQGAP--EDVQLLHHRQLRA
Sb033829_Sorbi1 KNTMAMNQPTLKTKDDGE-------AKQALVQDCLYVKVSMDGAPYLRKVDLKMYKNYKD
Sb020260_Sorbi1 RNVMTVQS--VKSKKEEEPEKQQSAAANASGNSSAFVKVSMDGAPYLRKVDLKMYNSYKD
                :.    .    .     *       . ..       :  :::***  ..*:*  : . : 

AT4G14550.1     L-------------SDALAKMFSSFTMGSY---GAQGMIDFMNESKVMDLLNSSEYVPSY
Sb020598_Sorbi1 AGDDERGDEAAGGPSERLRRLLAHVR-------GQGRRLDARRRRPLGDVRGVVQAPPDH
Sb033829_Sorbi1 L-------------SLALEKMFSCFTVGHSESNGKSGR-EGLSDCRLMDHKNGTELVLTY
Sb020260_Sorbi1 L-------------SIALKKMFSTFTTSG----------NNMNEGKLVDPVSGADVVTTY
                              *  * :::: .              :      : *  .  :    :

AT4G14550.1     E-------DKDGDWMLVGDVPWPMFVES--C------KRLRIMKGSEAIGLAPRAMEKFK
Sb020598_Sorbi1 ERIGSRRPRTQGD----GQVQQQLLSKAYYCGNASVSSRYQLTATVDNVLLLLLLHSVS-
Sb033829_Sorbi1 K-------DKDGDWMLVGDVPWRMFTGS--C------RRLRIMKGSDAVGLAPRVSDKSK
Sb020260_Sorbi1 E-------DKDGDWMLVGDVPWEMFVES--C------KRLRIMKSSEAIGLAPRTKDKCK
                :        .:**    *:*   ::  :  *       * ::    : : *     .   

AT4G14550.1     NRS
Sb020598_Sorbi1 ---
Sb033829_Sorbi1 NG-
Sb020260_Sorbi1 NKS
BoxShade v3.31 C (beta, 970507) Output
AT4G14550.1     - - - - - - - - - - - - - - - - - - - - - M N L K E - - - - - - - - - - - - - - - - - - T E L C L G L P G G T E T - - -
Sb020598_Sorbi1    - G G P R V R G D - - - - - - - - - - - - R A P A R - - - - - - - - P A R - - - - - - - R Q R R R G C R G G E E A G F R
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - M A P P Q E Q D Y I G L S P A A A A A - - - - T E L R L G L P G T E E A - - -
Sb020260_Sorbi1    R G G A Q G E R D N D G R D R L A S N Q L L A P A E P K - - - - - - P M A G A D V D V G T E L R L G L P G G G - - - - -
 
AT4G14550.1     - - V E S P A K S G V - - - - - - - - - - G N - - - - - - - - - - - - - - - - K R G F S E T V D L K L N L Q S N - - - -
Sb020598_Sorbi1    G D H R P Q A E A G A - - - - - - - - A G G A A L G E G G G G W R W R R R R P R R G P T V V A - - - - - - - S S S Q H R
Sb033829_Sorbi1    - - D G G E A A A G T P L T L E L L P K G G A - - - - - - - - - - - - - - - - K R G F T D A I - - - - - - - - - - - - -
Sb020260_Sorbi1    - - - - - - A E A A K - - - - - - - - - - A A - - - - - - - - - - - - - - - - K R G F E D T I D L K L K L P T A G - - -
 
AT4G14550.1     - - K Q G H V D L N T N G A P K E K T F L K D P S - - - - - - K P - - - - - - - - - - P A - K A Q V V G W P P V R N Y R
Sb020598_Sorbi1    R R R Y G H E E V A E P E Q R G H R R R A A G P R - - - K A S R P Q G T G G G L A A R P V V P Q E H P G R P I P E K W R
Sb033829_Sorbi1    - - - - - - - - V R R E A A A R G K A P A E D E E V D K K K T Q A - - - - - - - - - - P A A K A Q V V G W P P I R S Y R
Sb020260_Sorbi1    - M E E A A A A K P E P A A E K A K R P A E A P A A D - - A E K P - - - - - - - - - - P A P K A Q A V G W P P V R S Y R
 
AT4G14550.1     K N V M A N Q - - - - K S G E A E E - - - - - - - A M S S G G G T V A F V K V S M D G A P Y L R K V D L K M Y T S Y K D
Sb020598_Sorbi1    R R Q G Q R R Q - D V T G V R E G E - H G R R A V P A Q G G P E D V R E L P G A V Q G A P - - E D V Q L L H H R Q L R A
Sb033829_Sorbi1    K N T M A M N Q P T L K T K D D G E - - - - - - - A K Q A L V Q D C L Y V K V S M D G A P Y L R K V D L K M Y K N Y K D
Sb020260_Sorbi1    R N V M T V Q S - - V K S K K E E E P E K Q Q S A A A N A S G N S S A F V K V S M D G A P Y L R K V D L K M Y N S Y K D
 
AT4G14550.1     L - - - - - - - - - - - - - S D A L A K M F S S F T M G S Y - - - G A Q G M I D F M N E S K V M D L L N S S E Y V P S Y
Sb020598_Sorbi1    A G D D E R G D E A A G G P S E R L R R L L A H V R - - - - - - - G Q G R R L D A R R R R P L G D V R G V V Q A P P D H
Sb033829_Sorbi1    L - - - - - - - - - - - - - S L A L E K M F S C F T V G H S E S N G K S G R - E G L S D C R L M D H K N G T E L V L T Y
Sb020260_Sorbi1    L - - - - - - - - - - - - - S I A L K K M F S T F T T S G - - - - - - - - - - N N M N E G K L V D P V S G A D V V T T Y
 
AT4G14550.1     E - - - - - - - D K D G D W M L V G D V P W P M F V E S - - C - - - - - - K R L R I M K G S E A I G L A P R A M E K F K
Sb020598_Sorbi1    E R I G S R R P R T Q G D - - - - G Q V Q Q Q L L S K A Y Y C G N A S V S S R Y Q L T A T V D N V L L L L L L H S V S -
Sb033829_Sorbi1    K - - - - - - - D K D G D W M L V G D V P W R M F T G S - - C - - - - - - R R L R I M K G S D A V G L A P R V S D K S K
Sb020260_Sorbi1    E - - - - - - - D K D G D W M L V G D V P W E M F V E S - - C - - - - - - K R L R I M K S S E A I G L A P R T K D K C K
 
AT4G14550.1     N R S
Sb020598_Sorbi1    - - -
Sb033829_Sorbi1    N G -
Sb020260_Sorbi1    N K S
 
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