fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14550.1 NLKETELCLGLPGGTE at 6/228 in AT4G14550.1
FSETVDLKLNLQSNKQ at 37/228 in AT4G14550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.580645161 II
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_not 0.516129032 III
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_not 0.493087557 III
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.453917050 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14550.1     ---------------------MNLKE------------------TELCLGLPGGTET---
Sb020598_Sorbi1 -GGPRVRGD------------RAPAR--------PAR-------RQRRRGCRGGEEAGFR
Sb020260_Sorbi1 RGGAQGERDNDGRDRLASNQLLAPAEPK------PMAGADVDVGTELRLGLPGGG-----
Sb033829_Sorbi1 ---------------------MAPPQEQDYIGLSPAAAAA----TELRLGLPGTEEA---
Sb031861_Sorbi1 -------LD----EHLP----RHVADEH------PVA-----VLVLVGRHVLGAVEQIHQ
                                                                    *       

AT4G14550.1     ---------VESPAKSGV----------GN----------------KRGFSETVDLKLNL
Sb020598_Sorbi1 -------GDHRPQAEAGA--------AGGAALGEGGGGWRWRRRRPRRGPTVVA------
Sb020260_Sorbi1 -------------AEAAK----------AA----------------KRGFEDTIDLKLKL
Sb033829_Sorbi1 ---------DGGEAAAGTPLTLELLPKGGA----------------KRGFTDAI------
Sb031861_Sorbi1 LALVHAVHPLRPTASNGE----------GA-----------EHLLERLGQLLVALVHLEV
                             *  .           .                 : *   .       

AT4G14550.1     QSN------KQGHVDLNTNGAPKEKTF-------LKDPS------KP----------PA-
Sb020598_Sorbi1 -SSSQHRRRRYGHEEVAEPEQRGHRRR-------AAGPR---KASRPQGTGGGLAARPVV
Sb020260_Sorbi1 PTAG----MEEAAAAKPEPAAEKAKRP-------AEAPAAD--AEKP----------PAP
Sb033829_Sorbi1 ---------------VRREAAARGKAP-------AEDEEVDKKKTQA----------PAA
Sb031861_Sorbi1 -HLAQVRRAVQAHLHERRTTASCRRRRGLVGVFAAAGALV------------GLHGHDVL
                                        :                                 . 

AT4G14550.1     KAQVVGWPPVRNYRKNVMANQ----KSGEAEE-------AMSSGGGTVAFVKVSMDGAPY
Sb020598_Sorbi1 PQEHPGRPIPEKWRRRQGQRRQ-DVTGVREGE-HGRRAVPAQGGPEDVRELPGAVQGAP-
Sb020260_Sorbi1 KAQAVGWPPVRSYRRNVMTVQS--VKSKKEEEPEKQQSAAANASGNSSAFVKVSMDGAPY
Sb033829_Sorbi1 KAQVVGWPPIRSYRKNTMAMNQPTLKTKDDGE-------AKQALVQDCLYVKVSMDGAPY
Sb031861_Sorbi1 PERPDRWPS------------------------H-----------------HLSLGGARL
                  .    *                                             :: **  

AT4G14550.1     LRKVDLKMYTSYKDL-------------SDALAK--------------------------
Sb020598_Sorbi1 -EDVQLLHHRQLRAAGDDERGDEAAGGPSERLRR--------------------------
Sb020260_Sorbi1 LRKVDLKMYNSYKDL-------------SIALKK--------------------------
Sb033829_Sorbi1 LRKVDLKMYKNYKDL-------------SLALEK--------------------------
Sb031861_Sorbi1 LGGVSL----------------HGGGGDDAALARGPLHLPADGGLLRGGHAAGVFLGGGN
                   *.*                      .  * :                          

AT4G14550.1     ---MFSSFTMGSY---GAQGM-------IDFMNESKVMDLLNSSEYVPSYE-------DK
Sb020598_Sorbi1 ---LLAHVR-------GQGRR-------LDARRRRPLGDVRGVVQAPPDHERIGSRRPRT
Sb020260_Sorbi1 ---MFSTFTTSG-----------------NNMNEGKLVDPVSGADVVTTYE-------DK
Sb033829_Sorbi1 ---MFSCFTVGHSESNGKSGR--------EGLSDCRLMDHKNGTELVLTYK-------DK
Sb031861_Sorbi1 TVLMLVRLRRLQY---GRGSRRLQLQLEVDGLCEAPL---PGGDDRAPPFA---DHLSPA
                   ::  .                     :      :    .  :    .          

AT4G14550.1     DGDWMLVGDVPWPMFVES-----C-------------KRLRIMKGSEAIGLAPRAME---
Sb020598_Sorbi1 QGD----GQVQQQLLSKAY---YCG-------NASVSSRYQLTATVDNVLLLLLLHS---
Sb020260_Sorbi1 DGDWMLVGDVPWEMFVES-----C-------------KRLRIMKSSEAIGLAPRTKD---
Sb033829_Sorbi1 DGDWMLVGDVPWRMFTGS-----C-------------RRLRIMKGSDAVGLAPRVSD---
Sb031861_Sorbi1 AGQ----AQTELRLLEPQVRRRHCCCRRHWPSSSPLGSRLLLLPCFCFVCFALLASQDEE
                 *:    .:.   ::        *              *  :      : :     .   

AT4G14550.1     -----KFKNRS--------------
Sb020598_Sorbi1 -----VS------------------
Sb020260_Sorbi1 -----KCKNKS--------------
Sb033829_Sorbi1 -----KSKNG---------------
Sb031861_Sorbi1 AGWLCKCKGGGFANARGLGRGATTT
BoxShade v3.31 C (beta, 970507) Output
AT4G14550.1     - - - - - - - - - - - - - - - - - - - - - M N L K E - - - - - - - - - - - - - - - - - - T E L C L G L P G G T E T - - -
Sb020598_Sorbi1    - G G P R V R G D - - - - - - - - - - - - R A P A R - - - - - - - - P A R - - - - - - - R Q R R R G C R G G E E A G F R
Sb020260_Sorbi1    R G G A Q G E R D N D G R D R L A S N Q L L A P A E P K - - - - - - P M A G A D V D V G T E L R L G L P G G G - - - - -
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - M A P P Q E Q D Y I G L S P A A A A A - - - - T E L R L G L P G T E E A - - -
Sb031861_Sorbi1    - - - - - - - L D - - - - E H L P - - - - R H V A D E H - - - - - - P V A - - - - - V L V L V G R H V L G A V E Q I H Q
 
AT4G14550.1     - - - - - - - - - V E S P A K S G V - - - - - - - - - - G N - - - - - - - - - - - - - - - - K R G F S E T V D L K L N L
Sb020598_Sorbi1    - - - - - - - G D H R P Q A E A G A - - - - - - - - A G G A A L G E G G G G W R W R R R R P R R G P T V V A - - - - - -
Sb020260_Sorbi1    - - - - - - - - - - - - - A E A A K - - - - - - - - - - A A - - - - - - - - - - - - - - - - K R G F E D T I D L K L K L
Sb033829_Sorbi1    - - - - - - - - - D G G E A A A G T P L T L E L L P K G G A - - - - - - - - - - - - - - - - K R G F T D A I - - - - - -
Sb031861_Sorbi1    L A L V H A V H P L R P T A S N G E - - - - - - - - - - G A - - - - - - - - - - - E H L L E R L G Q L L V A L V H L E V
 
AT4G14550.1     Q S N - - - - - - K Q G H V D L N T N G A P K E K T F - - - - - - - L K D P S - - - - - - K P - - - - - - - - - - P A -
Sb020598_Sorbi1    - S S S Q H R R R R Y G H E E V A E P E Q R G H R R R - - - - - - - A A G P R - - - K A S R P Q G T G G G L A A R P V V
Sb020260_Sorbi1    P T A G - - - - M E E A A A A K P E P A A E K A K R P - - - - - - - A E A P A A D - - A E K P - - - - - - - - - - P A P
Sb033829_Sorbi1    - - - - - - - - - - - - - - - V R R E A A A R G K A P - - - - - - - A E D E E V D K K K T Q A - - - - - - - - - - P A A
Sb031861_Sorbi1    - H L A Q V R R A V Q A H L H E R R T T A S C R R R R G L V G V F A A A G A L V - - - - - - - - - - - - G L H G H D V L
 
AT4G14550.1     K A Q V V G W P P V R N Y R K N V M A N Q - - - - K S G E A E E - - - - - - - A M S S G G G T V A F V K V S M D G A P Y
Sb020598_Sorbi1    P Q E H P G R P I P E K W R R R Q G Q R R Q - D V T G V R E G E - H G R R A V P A Q G G P E D V R E L P G A V Q G A P -
Sb020260_Sorbi1    K A Q A V G W P P V R S Y R R N V M T V Q S - - V K S K K E E E P E K Q Q S A A A N A S G N S S A F V K V S M D G A P Y
Sb033829_Sorbi1    K A Q V V G W P P I R S Y R K N T M A M N Q P T L K T K D D G E - - - - - - - A K Q A L V Q D C L Y V K V S M D G A P Y
Sb031861_Sorbi1    P E R P D R W P S - - - - - - - - - - - - - - - - - - - - - - - - H - - - - - - - - - - - - - - - - - H L S L G G A R L
 
AT4G14550.1     L R K V D L K M Y T S Y K D L - - - - - - - - - - - - - S D A L A K - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    - E D V Q L L H H R Q L R A A G D D E R G D E A A G G P S E R L R R - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020260_Sorbi1    L R K V D L K M Y N S Y K D L - - - - - - - - - - - - - S I A L K K - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    L R K V D L K M Y K N Y K D L - - - - - - - - - - - - - S L A L E K - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    L G G V S L - - - - - - - - - - - - - - - - H G G G G D D A A L A R G P L H L P A D G G L L R G G H A A G V F L G G G N
 
AT4G14550.1     - - - M F S S F T M G S Y - - - G A Q G M - - - - - - - I D F M N E S K V M D L L N S S E Y V P S Y E - - - - - - - D K
Sb020598_Sorbi1    - - - L L A H V R - - - - - - - G Q G R R - - - - - - - L D A R R R R P L G D V R G V V Q A P P D H E R I G S R R P R T
Sb020260_Sorbi1    - - - M F S T F T T S G - - - - - - - - - - - - - - - - - N N M N E G K L V D P V S G A D V V T T Y E - - - - - - - D K
Sb033829_Sorbi1    - - - M F S C F T V G H S E S N G K S G R - - - - - - - - E G L S D C R L M D H K N G T E L V L T Y K - - - - - - - D K
Sb031861_Sorbi1    T V L M L V R L R R L Q Y - - - G R G S R R L Q L Q L E V D G L C E A P L - - - P G G D D R A P P F A - - - D H L S P A
 
AT4G14550.1     D G D W M L V G D V P W P M F V E S - - - - - C - - - - - - - - - - - - - K R L R I M K G S E A I G L A P R A M E - - -
Sb020598_Sorbi1    Q G D - - - - G Q V Q Q Q L L S K A Y - - - Y C G - - - - - - - N A S V S S R Y Q L T A T V D N V L L L L L L H S - - -
Sb020260_Sorbi1    D G D W M L V G D V P W E M F V E S - - - - - C - - - - - - - - - - - - - K R L R I M K S S E A I G L A P R T K D - - -
Sb033829_Sorbi1    D G D W M L V G D V P W R M F T G S - - - - - C - - - - - - - - - - - - - R R L R I M K G S D A V G L A P R V S D - - -
Sb031861_Sorbi1    A G Q - - - - A Q T E L R L L E P Q V R R R H C C C R R H W P S S S P L G S R L L L L P C F C F V C F A L L A S Q D E E
 
AT4G14550.1     - - - - - K F K N R S - - - - - - - - - - - - - -
Sb020598_Sorbi1    - - - - - V S - - - - - - - - - - - - - - - - - -
Sb020260_Sorbi1    - - - - - K C K N K S - - - - - - - - - - - - - -
Sb033829_Sorbi1    - - - - - K S K N G - - - - - - - - - - - - - - -
Sb031861_Sorbi1    A G W L C K C K G G G F A N A R G L G R G A T T T
 
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