fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14560.1 NLKDTELRLGLPGAQE at 12/168 in AT4G14560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041780 NLKATELRLGLPGTEE in 8/197 AT1G04240.1 1st_not 0.429508196 II
Sb031862 not found in 461aa AT1G04240.1 1st_not 0.422950819 II
Gm055370 NLKATELRLGLPGTEE in 18/194 AT5G43700.1 1st_not 0.642622950 II
Pt002787 NLKATELRLGLPGSDE in 13/195 AT5G43700.1 1st_not 0.636065573 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14560.1     ----------MEVTNGL-------NLKDTELRLGLPGAQEE-------------------
Sb031862_Sorbi1 GEAMEVAAASAAASFGLKAADDVDNLRATELRLGLPGTEEEPQQVHKATAAAAAVELPLL
pt002787_POPTR_ ----------MAYESDL-------NLKATELRLGLPGSDEP-------------------
Os041780_Os12t0 ----------------------MENLKATELRLGLPGTEEE-------------------
gm055370_Glyma2 ---ME--NTTVTYQTDL-------NLKATELRLGLPGTEES-------------------
                                        **: *********::*                    

AT4G14560.1     ----QQLELSC-VRSNNKRKNNDSTEESAP------------------PPAKTQIVGWPP
Sb031862_Sorbi1 PAATTPPAPST-PR-GKKRDVVGSGNEDAPKKRDG------NADAAP-PAAKAQVVGWPP
pt002787_POPTR_ ----EKPSTTPSVR-SNKRASPEISEESRSKGSSSVSSNVENGERDSAPPAKAQVVGWPP
Os041780_Os12t0 ----AAPPPST-PRAGSKRALAGEPDQ---------------AKIKPAAAAKAQVVGWPP
gm055370_Glyma2 ----EEKTLSAGARINNKRPLTETSDECASNGTSSAPHE----KTETAPPAKTKIVGWPP
                         :   * ..**      ::                     ..**:::*****

AT4G14560.1     VRSNRKN-----------------------------NNNKNVSYVKVSMDGAPYLRKIDL
Sb031862_Sorbi1 VRSYRKSCFQQQQQQAAAKSKPAPAAPAEE-------APATGLFVKVSMDGAPYLRKVDL
pt002787_POPTR_ IRSYRKNCL--QPK-------------------KNDQVDGAGMYVKVSVDGAPYLRKIDL
Os041780_Os12t0 VRSYRKSCL--QPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKIDL
gm055370_Glyma2 IRSYRKNSL--Q------------------------ESEGAGIYVKVSMDGAPYLRKIDL
                :** **.                                    :****:********:**

AT4G14560.1     KMYKNYPELLKALENMFK-FTV-GEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFS
Sb031862_Sorbi1 KMYKGYRELREALEAMFLCFSGSGGSADAPAVNPSDFAVTYEDKDGDLMLVGDVPFDMFI
pt002787_POPTR_ KVYKSYPELLKALENMFK-LTI-GEYSENEGYNGSEFAPTYEDKDGDWMLVGDVPWDMFI
Os041780_Os12t0 KVYKGYRELREALEAMFLCFSG-GAAADA-AVNPSDFAVTYEDKDGDLMLVGDVPFEMFI
gm055370_Glyma2 KVYGGYTQLLKSLENMFK-LTI-GEHSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFV
                *:* .* :* ::** **  ::  *  ::  . : * :. ******** *******::** 

AT4G14560.1     SSCQKLRIMKGSEAPTAL------
Sb031862_Sorbi1 STCKRLRIMKGSEA-RGLGSVKNN
pt002787_POPTR_ SSCKRLRIMKGSEA-RGLGC----
Os041780_Os12t0 STCKRLRIMKGSEA-RGLGATRG-
gm055370_Glyma2 TSCRRLRIMKGSEA-RGLGCAV--
                ::*::*********  .*
BoxShade v3.31 C (beta, 970507) Output
AT4G14560.1     - - - - - - - - - - M E V T N G L - - - - - - - N L K D T E L R L G L P G A Q E E - - - - - - - - - - - - - - - - - - -
Sb031862_Sorbi1    G E A M E V A A A S A A A S F G L K A A D D V D N L R A T E L R L G L P G T E E E P Q Q V H K A T A A A A A V E L P L L
pt002787_POPTR_    - - - - - - - - - - M A Y E S D L - - - - - - - N L K A T E L R L G L P G S D E P - - - - - - - - - - - - - - - - - - -
Os041780_Os12t0    - - - - - - - - - - - - - - - - - - - - - - M E N L K A T E L R L G L P G T E E E - - - - - - - - - - - - - - - - - - -
gm055370_Glyma2    - - - M E - - N T T V T Y Q T D L - - - - - - - N L K A T E L R L G L P G T E E S - - - - - - - - - - - - - - - - - - -
 
AT4G14560.1     - - - - Q Q L E L S C - V R S N N K R K N N D S T E E S A P - - - - - - - - - - - - - - - - - - P P A K T Q I V G W P P
Sb031862_Sorbi1    P A A T T P P A P S T - P R - G K K R D V V G S G N E D A P K K R D G - - - - - - N A D A A P - P A A K A Q V V G W P P
pt002787_POPTR_    - - - - E K P S T T P S V R - S N K R A S P E I S E E S R S K G S S S V S S N V E N G E R D S A P P A K A Q V V G W P P
Os041780_Os12t0    - - - - A A P P P S T - P R A G S K R A L A G E P D Q - - - - - - - - - - - - - - - A K I K P A A A A K A Q V V G W P P
gm055370_Glyma2    - - - - E E K T L S A G A R I N N K R P L T E T S D E C A S N G T S S A P H E - - - - K T E T A P P A K T K I V G W P P
 
AT4G14560.1     V R S N R K N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N N K N V S Y V K V S M D G A P Y L R K I D L
Sb031862_Sorbi1    V R S Y R K S C F Q Q Q Q Q Q A A A K S K P A P A A P A E E - - - - - - - A P A T G L F V K V S M D G A P Y L R K V D L
pt002787_POPTR_    I R S Y R K N C L - - Q P K - - - - - - - - - - - - - - - - - - - K N D Q V D G A G M Y V K V S V D G A P Y L R K I D L
Os041780_Os12t0    V R S Y R K S C L - - Q P T T T T T K S K P P P A A A A A E T Q Q K E D V A G A G G L F V K V S M D G A P Y L R K I D L
gm055370_Glyma2    I R S Y R K N S L - - Q - - - - - - - - - - - - - - - - - - - - - - - - E S E G A G I Y V K V S M D G A P Y L R K I D L
 
AT4G14560.1     K M Y K N Y P E L L K A L E N M F K - F T V - G E Y S E R E G Y K G S G F V P T Y E D K D G D W M L V G D V P W D M F S
Sb031862_Sorbi1    K M Y K G Y R E L R E A L E A M F L C F S G S G G S A D A P A V N P S D F A V T Y E D K D G D L M L V G D V P F D M F I
pt002787_POPTR_    K V Y K S Y P E L L K A L E N M F K - L T I - G E Y S E N E G Y N G S E F A P T Y E D K D G D W M L V G D V P W D M F I
Os041780_Os12t0    K V Y K G Y R E L R E A L E A M F L C F S G - G A A A D A - A V N P S D F A V T Y E D K D G D L M L V G D V P F E M F I
gm055370_Glyma2    K V Y G G Y T Q L L K S L E N M F K - L T I - G E H S E K E G Y K G S D Y A P T Y E D K D G D W M L V G D V P W D M F V
 
AT4G14560.1     S S C Q K L R I M K G S E A P T A L - - - - - -
Sb031862_Sorbi1    S T C K R L R I M K G S E A - R G L G S V K N N
pt002787_POPTR_    S S C K R L R I M K G S E A - R G L G C - - - -
Os041780_Os12t0    S T C K R L R I M K G S E A - R G L G A T R G -
gm055370_Glyma2    T S C R R L R I M K G S E A - R G L G C A V - -
 
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