fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14560.1 NLKDTELRLGLPGAQE at 12/168 in AT4G14560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041780 NLKATELRLGLPGTEE in 8/197 AT1G04240.1 1st_not 0.429508196 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14560.1     MEVTNGLNLKDTELRLGLPGAQEEQQLELSCVRSNNKRKNNDSTEESAPPP---AKTQIV
Os041780_Os12t0 ME-----NLKATELRLGLPGTEEEAAPPPSTPRAGSKRALAGEPDQAKIKPAAAAKAQVV
                **     *** *********::**     *  *:..**   ...:::   *   **:*:*

AT4G14560.1     GWPPVRSNRKN----------------------NNNKNVS-----YVKVSMDGAPYLRKI
Os041780_Os12t0 GWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKI
                ******* **.                      :::::*:     :**************

AT4G14560.1     DLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFS
Os041780_Os12t0 DLKVYKGYRELREALEAMFLCFSGGAAADAAVNPSDFAVTYEDKDGDLMLVGDVPFEMFI
                ***:**.* ** :*** **    *  :   . : *.*. ******** *******::** 

AT4G14560.1     SSCQKLRIMKGSEAPTAL-----
Os041780_Os12t0 STCKRLRIMKGSEA-RGLGATRG
                *:*::*********  .*
BoxShade v3.31 C (beta, 970507) Output
AT4G14560.1     M E V T N G L N L K D T E L R L G L P G A Q E E Q Q L E L S C V R S N N K R K N N D S T E E S A P P P - - - A K T Q I V
Os041780_Os12t0    M E - - - - - N L K A T E L R L G L P G T E E E A A P P P S T P R A G S K R A L A G E P D Q A K I K P A A A A K A Q V V
 
AT4G14560.1     G W P P V R S N R K N - - - - - - - - - - - - - - - - - - - - - - N N N K N V S - - - - - Y V K V S M D G A P Y L R K I
Os041780_Os12t0    G W P P V R S Y R K S C L Q P T T T T T K S K P P P A A A A A E T Q Q K E D V A G A G G L F V K V S M D G A P Y L R K I
 
AT4G14560.1     D L K M Y K N Y P E L L K A L E N M F K F T V G E Y S E R E G Y K G S G F V P T Y E D K D G D W M L V G D V P W D M F S
Os041780_Os12t0    D L K V Y K G Y R E L R E A L E A M F L C F S G G A A A D A A V N P S D F A V T Y E D K D G D L M L V G D V P F E M F I
 
AT4G14560.1     S S C Q K L R I M K G S E A P T A L - - - - -
Os041780_Os12t0    S T C K R L R I M K G S E A - R G L G A T R G
 
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