fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14560.1 NLKDTELRLGLPGAQE at 12/168 in AT4G14560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031862 not found in 461aa AT1G04240.1 1st_not 0.422950819 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14560.1     ---MEVTN-------GL-------NLKDTELRLGLPGAQEEQQ-----------LEL---
Sb031862_Sorbi1 GEAMEVAAASAAASFGLKAADDVDNLRATELRLGLPGTEEEPQQVHKATAAAAAVELPLL
                   ***:        **       **: *********::** *           :**   

AT4G14560.1     -----------------SCVRSNNKR--KNNDSTEESAPPPAKTQIVGWPPVRSNRKNNN
Sb031862_Sorbi1 PAATTPPAPSTPRGKKRDVVGSGNEDAPKKRDGNADAAPPAAKAQVVGWPPVRSYRKSCF
                                 . * *.*:   *:.*.. ::***.**:*:******** **.  

AT4G14560.1     NKNVS----------------------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENM
Sb031862_Sorbi1 QQQQQQAAAKSKPAPAAPAEEAPATGLFVKVSMDGAPYLRKVDLKMYKGYRELREALEAM
                ::: .                      :*************:******.* ** :*** *

AT4G14560.1     FK-FT-VGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEAPT
Sb031862_Sorbi1 FLCFSGSGGSADAPAVNPSDFAVTYEDKDGDLMLVGDVPFDMFISTCKRLRIMKGSEA-R
                *  *:  *  ::  . : *.*. ******** *******:*** *:*::*********  

AT4G14560.1     AL------
Sb031862_Sorbi1 GLGSVKNN
                .*
BoxShade v3.31 C (beta, 970507) Output
AT4G14560.1     - - - M E V T N - - - - - - - G L - - - - - - - N L K D T E L R L G L P G A Q E E Q Q - - - - - - - - - - - L E L - - -
Sb031862_Sorbi1    G E A M E V A A A S A A A S F G L K A A D D V D N L R A T E L R L G L P G T E E E P Q Q V H K A T A A A A A V E L P L L
 
AT4G14560.1     - - - - - - - - - - - - - - - - - S C V R S N N K R - - K N N D S T E E S A P P P A K T Q I V G W P P V R S N R K N N N
Sb031862_Sorbi1    P A A T T P P A P S T P R G K K R D V V G S G N E D A P K K R D G N A D A A P P A A K A Q V V G W P P V R S Y R K S C F
 
AT4G14560.1     N K N V S - - - - - - - - - - - - - - - - - - - - - - Y V K V S M D G A P Y L R K I D L K M Y K N Y P E L L K A L E N M
Sb031862_Sorbi1    Q Q Q Q Q Q A A A K S K P A P A A P A E E A P A T G L F V K V S M D G A P Y L R K V D L K M Y K G Y R E L R E A L E A M
 
AT4G14560.1     F K - F T - V G E Y S E R E G Y K G S G F V P T Y E D K D G D W M L V G D V P W D M F S S S C Q K L R I M K G S E A P T
Sb031862_Sorbi1    F L C F S G S G G S A D A P A V N P S D F A V T Y E D K D G D L M L V G D V P F D M F I S T C K R L R I M K G S E A - R
 
AT4G14560.1     A L - - - - - -
Sb031862_Sorbi1    G L G S V K N N
 
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