fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14560.1 NLKDTELRLGLPGAQE at 12/168 in AT4G14560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031862 not found in 461aa AT1G04240.1 1st_not 0.422950819 II
Sb022746 not found in 372aa AT1G04240.1 not_not 0.413114754 III
Sb031861 not found in 502aa AT3G04730.1 not_not 0.4 III
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.4 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14560.1     -----------------------------MEVTNGLN-------------LKDTEL--RL
Sb033829_Sorbi1 ------------------------MAPPQEQDYIGLSPA----------AAAATEL--RL
Sb022746_Sorbi1 SPRLHPHLLLILILLSLSISRASKNAASSYLASKQAFSSDSFMEIVDADNLSATEL--RL
Sb031861_Sorbi1 ---LDEHLP----------RHVADEHPVAVLVLVGRH------------VLGAVEQIHQL
Sb031862_Sorbi1 -------------------GEAMEVAAASAAASFGLKAAD------DVDNLRATEL--RL
                                                                     .*   :*

AT4G14560.1     GL--------PGAQEEQ-------------------QLEL--------------------
Sb033829_Sorbi1 GL--------PGTEEADGGEAA---------AGTPLTLELLPKG----------GAKRGF
Sb022746_Sorbi1 GL--------PGTSSSDDWQKK-------------------------PSPSV--GAKR--
Sb031861_Sorbi1 ALVHAVHPLRPTASNGEGAEHLLERLGQLLVALVHLEVHL-------------AQVRR--
Sb031862_Sorbi1 GL--------PGTEEEPQQVHKAT------AAAAAVELPLLPAATTPPAPSTPRGKKR--
                .*        * :..                                             

AT4G14560.1     --SCVRSNNKRKN-NDSTEE-------------SAPPP-AKTQIVGWP-----PVRSNRK
Sb033829_Sorbi1 TDAIVRREAAARG-KAPAEDEEV------DKKKTQAPA-AKAQVVGWP-----PIRSYRK
Sb022746_Sorbi1 --ALDDTRSEASGTSSPATAADL----DLDHDHDAAPP-PKAQVVGWP-----PVRAYRK
Sb031861_Sorbi1 --AVQAHLHERRTTASCRRRRGLVGVFA-----------AAGALVGLHGHDVLPERPDRW
Sb031862_Sorbi1 --DVVGSGNE----DAPKKR---------DGNADAAPPAAKAQVVGWP-----PVRSYRK
                                                       .   :**       * *. * 

AT4G14560.1     NNNNKNVS------------------------------------------YVKVSMDGAP
Sb033829_Sorbi1 NTMAMNQPTLK------TKDDGEAKQALVQD-----------------CLYVKVSMDGAP
Sb022746_Sorbi1 NTFQAAAAAAK-------KADQQQQQQGG-------------------GLYVKVSMDGAP
Sb031861_Sorbi1 PSHHLSLGGARLLGGVSLHGGGGDDAALARGPLHLPADGGLLRGGHAAGVFLGGGNTVLM
Sb031862_Sorbi1 SCFQ-----------------QQQQQAAAKSK---PAPAAPAEEAPATGLFVKVSMDGAP
                                                                  ::  .     

AT4G14560.1     YLRKIDLKMYKNYPELLKALENMFK-FTVGEYSE------REGY---------KGSGFVP
Sb033829_Sorbi1 YLRKVDLKMYKNYKDLSLALEKMFSCFTVG-HSESNGKSGREGLSDCRLMDHKNGTELVL
Sb022746_Sorbi1 YLRKVDLRMYKGYRELREALDALFT----KSFSAAAAEG--------------GDHQHAI
Sb031861_Sorbi1 LVRLRRLQYGRGSRRLQLQLE-------------------VDGLCEAPLP---GGDDRAP
Sb031862_Sorbi1 YLRKVDLKMYKGYRELREALEAMFLCFSGSGGSADAPAV--------------NPSDFAV
                 :*   *:  :.   *   *:                                     . 

AT4G14560.1     TYEDK-----------------------------------DGDWMLVGDVPWDMFSSSCQ
Sb033829_Sorbi1 TYKDK-----------------------------------DGDWMLVGDVPWRMFTGSCR
Sb022746_Sorbi1 AYEDK-----------------------------------DGDLMLVGDVPWDMFISSCK
Sb031861_Sorbi1 PFADHLSPAAGQAQTELRLLEPQVRRRHCCCRRHWPSSSPLGSRLLL--LPCFCFV--CF
Sb031862_Sorbi1 TYEDK-----------------------------------DGDLMLVGDVPFDMFISTCK
                .: *:                                    *. :*:  :*   *   * 

AT4G14560.1     KLRIMKGSE------------------APTAL------
Sb033829_Sorbi1 RLRIMKGSDA--------------VGLAPRVSDKSKNG
Sb022746_Sorbi1 KLRIMKGSEA--------------R-------------
Sb031861_Sorbi1 ALLASQDEEAGWLCKCKGGGFANARGLGRGATTT----
Sb031862_Sorbi1 RLRIMKGSEA--------------RGLGSVKNN-----
                 *   :..:
BoxShade v3.31 C (beta, 970507) Output
AT4G14560.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E V T N G L N - - - - - - - - - - - - - L K D T E L - - R L
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - M A P P Q E Q D Y I G L S P A - - - - - - - - - - A A A A T E L - - R L
Sb022746_Sorbi1    S P R L H P H L L L I L I L L S L S I S R A S K N A A S S Y L A S K Q A F S S D S F M E I V D A D N L S A T E L - - R L
Sb031861_Sorbi1    - - - L D E H L P - - - - - - - - - - R H V A D E H P V A V L V L V G R H - - - - - - - - - - - - V L G A V E Q I H Q L
Sb031862_Sorbi1    - - - - - - - - - - - - - - - - - - - G E A M E V A A A S A A A S F G L K A A D - - - - - - D V D N L R A T E L - - R L
 
AT4G14560.1     G L - - - - - - - - P G A Q E E Q - - - - - - - - - - - - - - - - - - - Q L E L - - - - - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    G L - - - - - - - - P G T E E A D G G E A A - - - - - - - - - A G T P L T L E L L P K G - - - - - - - - - - G A K R G F
Sb022746_Sorbi1    G L - - - - - - - - P G T S S S D D W Q K K - - - - - - - - - - - - - - - - - - - - - - - - - P S P S V - - G A K R - -
Sb031861_Sorbi1    A L V H A V H P L R P T A S N G E G A E H L L E R L G Q L L V A L V H L E V H L - - - - - - - - - - - - - A Q V R R - -
Sb031862_Sorbi1    G L - - - - - - - - P G T E E E P Q Q V H K A T - - - - - - A A A A A V E L P L L P A A T T P P A P S T P R G K K R - -
 
AT4G14560.1     - - S C V R S N N K R K N - N D S T E E - - - - - - - - - - - - - S A P P P - A K T Q I V G W P - - - - - P V R S N R K
Sb033829_Sorbi1    T D A I V R R E A A A R G - K A P A E D E E V - - - - - - D K K K T Q A P A - A K A Q V V G W P - - - - - P I R S Y R K
Sb022746_Sorbi1    - - A L D D T R S E A S G T S S P A T A A D L - - - - D L D H D H D A A P P - P K A Q V V G W P - - - - - P V R A Y R K
Sb031861_Sorbi1    - - A V Q A H L H E R R T T A S C R R R R G L V G V F A - - - - - - - - - - - A A G A L V G L H G H D V L P E R P D R W
Sb031862_Sorbi1    - - D V V G S G N E - - - - D A P K K R - - - - - - - - - D G N A D A A P P A A K A Q V V G W P - - - - - P V R S Y R K
 
AT4G14560.1     N N N N K N V S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y V K V S M D G A P
Sb033829_Sorbi1    N T M A M N Q P T L K - - - - - - T K D D G E A K Q A L V Q D - - - - - - - - - - - - - - - - - C L Y V K V S M D G A P
Sb022746_Sorbi1    N T F Q A A A A A A K - - - - - - - K A D Q Q Q Q Q Q G G - - - - - - - - - - - - - - - - - - - G L Y V K V S M D G A P
Sb031861_Sorbi1    P S H H L S L G G A R L L G G V S L H G G G G D D A A L A R G P L H L P A D G G L L R G G H A A G V F L G G G N T V L M
Sb031862_Sorbi1    S C F Q - - - - - - - - - - - - - - - - - Q Q Q Q Q A A A K S K - - - P A P A A P A E E A P A T G L F V K V S M D G A P
 
AT4G14560.1     Y L R K I D L K M Y K N Y P E L L K A L E N M F K - F T V G E Y S E - - - - - - R E G Y - - - - - - - - - K G S G F V P
Sb033829_Sorbi1    Y L R K V D L K M Y K N Y K D L S L A L E K M F S C F T V G - H S E S N G K S G R E G L S D C R L M D H K N G T E L V L
Sb022746_Sorbi1    Y L R K V D L R M Y K G Y R E L R E A L D A L F T - - - - K S F S A A A A E G - - - - - - - - - - - - - - G D H Q H A I
Sb031861_Sorbi1    L V R L R R L Q Y G R G S R R L Q L Q L E - - - - - - - - - - - - - - - - - - - V D G L C E A P L P - - - G G D D R A P
Sb031862_Sorbi1    Y L R K V D L K M Y K G Y R E L R E A L E A M F L C F S G S G G S A D A P A V - - - - - - - - - - - - - - N P S D F A V
 
AT4G14560.1     T Y E D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G D W M L V G D V P W D M F S S S C Q
Sb033829_Sorbi1    T Y K D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G D W M L V G D V P W R M F T G S C R
Sb022746_Sorbi1    A Y E D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G D L M L V G D V P W D M F I S S C K
Sb031861_Sorbi1    P F A D H L S P A A G Q A Q T E L R L L E P Q V R R R H C C C R R H W P S S S P L G S R L L L - - L P C F C F V - - C F
Sb031862_Sorbi1    T Y E D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G D L M L V G D V P F D M F I S T C K
 
AT4G14560.1     K L R I M K G S E - - - - - - - - - - - - - - - - - - A P T A L - - - - - -
Sb033829_Sorbi1    R L R I M K G S D A - - - - - - - - - - - - - - V G L A P R V S D K S K N G
Sb022746_Sorbi1    K L R I M K G S E A - - - - - - - - - - - - - - R - - - - - - - - - - - - -
Sb031861_Sorbi1    A L L A S Q D E E A G W L C K C K G G G F A N A R G L G R G A T T T - - - -
Sb031862_Sorbi1    R L R I M K G S E A - - - - - - - - - - - - - - R G L G S V K N N - - - - -
 
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