fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G15248.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037731 not found in 124aa AT4G15248.1 1st_1st 0.392857142 Ib
Pt037451 not found in 125aa AT4G15248.1 1st_1st 0.448412698 Ia
Pt003435 not found in 124aa AT4G15248.1 not_1st 0.424603174 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G15248.1     MCRGFEKEEERRSDNGGCQRLCTESH--KAPVSCELCGENATVYCEADAAFLCRKCDRWV
pt037451_POPTR_ MCRGI--HQERNNQGGSCGEEVVSSKATSRLVCCELCGSRASLYCQADDAFLCQKCDKWV
gm037731_Glyma1 MCKG----AEGEKQHGFCSSYLHKECATRSATCCELCGLQASLYCQADDAYLCRKCDKRV
pt003435_POPTR_ MCRG---NQERSNQGSSCNKEAVSPNATSRFVCCELCGSRATLYCQADHAFLCQKCDGWV
                **:*     *  .: . *     .       ..***** .*::**:** *:**:***  *

AT4G15248.1     HSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIA--------RIEEHSS-D
pt037451_POPTR_ HGANFLAQRHVRCMLCNTCQNLTQRYLIGASTELLLPTIVSWR-ERRQCNSNLEKKSSGS
gm037731_Glyma1 HEANFLALRHIRCFLCNTCQNLTRRYLIGASIEVVLPANINWTIGNLPSNRGIHRKCS-R
pt003435_POPTR_ HGANFLALRHVRNMLCNTCQNLTQRCLIGASTEVMLSTIVSWR-ERRDRNSNLEKKCSGS
                * ***** **:* .:*.**::**:* *:* . :::*.               :..:.*  

AT4G15248.1     HKIPFVFL-
pt037451_POPTR_ LKMPFLFL-
gm037731_Glyma1 MHNNLSLLL
pt003435_POPTR_ LKKPFSFL-
                 :  : :*
BoxShade v3.31 C (beta, 970507) Output
AT4G15248.1     M C R G F E K E E E R R S D N G G C Q R L C T E S H - - K A P V S C E L C G E N A T V Y C E A D A A F L C R K C D R W V
pt037451_POPTR_    M C R G I - - H Q E R N N Q G G S C G E E V V S S K A T S R L V C C E L C G S R A S L Y C Q A D D A F L C Q K C D K W V
gm037731_Glyma1    M C K G - - - - A E G E K Q H G F C S S Y L H K E C A T R S A T C C E L C G L Q A S L Y C Q A D D A Y L C R K C D K R V
pt003435_POPTR_    M C R G - - - N Q E R S N Q G S S C N K E A V S P N A T S R F V C C E L C G S R A T L Y C Q A D H A F L C Q K C D G W V
 
AT4G15248.1     H S A N F L A R R H L R R V I C T T C R K L T R R C L V G D N F N V V L P E I R M I A - - - - - - - - R I E E H S S - D
pt037451_POPTR_    H G A N F L A Q R H V R C M L C N T C Q N L T Q R Y L I G A S T E L L L P T I V S W R - E R R Q C N S N L E K K S S G S
gm037731_Glyma1    H E A N F L A L R H I R C F L C N T C Q N L T R R Y L I G A S I E V V L P A N I N W T I G N L P S N R G I H R K C S - R
pt003435_POPTR_    H G A N F L A L R H V R N M L C N T C Q N L T Q R C L I G A S T E V M L S T I V S W R - E R R D R N S N L E K K C S G S
 
AT4G15248.1     H K I P F V F L -
pt037451_POPTR_    L K M P F L F L -
gm037731_Glyma1    M H N N L S L L L
pt003435_POPTR_    L K K P F S F L -
 
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