fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G15248.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003435 not found in 124aa AT4G15248.1 not_1st 0.424603174 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G15248.1     MCRGFEKEEERRSDNGGCQRLCTESHKAP------VSCELCGENATVYCEADAAFLCRKC
pt003435_POPTR_ MCRG----NQERSNQGSS---CNKEAVSPNATSRFVCCELCGSRATLYCQADHAFLCQKC
                ****    ::.**::*..   *.:.  :*      *.*****..**:**:** ****:**

AT4G15248.1     DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI--------RMIARIEEH
pt003435_POPTR_ DGWVHGANFLALRHVRNMLCNTCQNLTQRCLIGASTEVMLSTIVSWRERRDRNSNLEKKC
                * ***.***** **:*.::*.**::**:***:* . :*:*. *        *     :: 

AT4G15248.1     SSDHKIPFVFL
pt003435_POPTR_ SGSLKKPFSFL
                *.. * ** **
BoxShade v3.31 C (beta, 970507) Output
AT4G15248.1     M C R G F E K E E E R R S D N G G C Q R L C T E S H K A P - - - - - - V S C E L C G E N A T V Y C E A D A A F L C R K C
pt003435_POPTR_    M C R G - - - - N Q E R S N Q G S S - - - C N K E A V S P N A T S R F V C C E L C G S R A T L Y C Q A D H A F L C Q K C
 
AT4G15248.1     D R W V H S A N F L A R R H L R R V I C T T C R K L T R R C L V G D N F N V V L P E I - - - - - - - - R M I A R I E E H
pt003435_POPTR_    D G W V H G A N F L A L R H V R N M L C N T C Q N L T Q R C L I G A S T E V M L S T I V S W R E R R D R N S N L E K K C
 
AT4G15248.1     S S D H K I P F V F L
pt003435_POPTR_    S G S L K K P F S F L
 
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