fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G15248.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037451 not found in 125aa AT4G15248.1 1st_1st 0.448412698 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G15248.1     MCRGFEKEEERRSDNGGCQRLCTE---SHKAP---VSCELCGENATVYCEADAAFLCRKC
pt037451_POPTR_ MCRGIHQE---RNNQGGS---CGEEVVSSKATSRLVCCELCGSRASLYCQADDAFLCQKC
                ****:.:*   *.::**.   * *   * **.   *.*****..*::**:** ****:**

AT4G15248.1     DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI-------RMIARIEEHS
pt037451_POPTR_ DKWVHGANFLAQRHVRCMLCNTCQNLTQRYLIGASTELLLPTIVSWRERRQCNSNLEKKS
                *:***.*****:**:* ::*.**::**:* *:* . :::** *       :  :.:*::*

AT4G15248.1     SDH-KIPFVFL
pt037451_POPTR_ SGSLKMPFLFL
                *.  *:**:**
BoxShade v3.31 C (beta, 970507) Output
AT4G15248.1     M C R G F E K E E E R R S D N G G C Q R L C T E - - - S H K A P - - - V S C E L C G E N A T V Y C E A D A A F L C R K C
pt037451_POPTR_    M C R G I H Q E - - - R N N Q G G S - - - C G E E V V S S K A T S R L V C C E L C G S R A S L Y C Q A D D A F L C Q K C
 
AT4G15248.1     D R W V H S A N F L A R R H L R R V I C T T C R K L T R R C L V G D N F N V V L P E I - - - - - - - R M I A R I E E H S
pt037451_POPTR_    D K W V H G A N F L A Q R H V R C M L C N T C Q N L T Q R Y L I G A S T E L L L P T I V S W R E R R Q C N S N L E K K S
 
AT4G15248.1     S D H - K I P F V F L
pt037451_POPTR_    S G S L K M P F L F L
 
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