fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G15248.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037451 not found in 125aa AT4G15248.1 1st_1st 0.448412698 Ia
Pt003435 not found in 124aa AT4G15248.1 not_1st 0.424603174 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G15248.1     MCRGFEKEEERRSDNGGCQRLCTESHKAP--VSCELCGENATVYCEADAAFLCRKCDRWV
pt003435_POPTR_ MCRG---NQERSNQGSSCNKEAVSPNATSRFVCCELCGSRATLYCQADHAFLCQKCDGWV
pt037451_POPTR_ MCRGI--HQERNNQGGSCGEEVVSSKATSRLVCCELCGSRASLYCQADDAFLCQKCDKWV
                ****   .:** .:...* .  ...: :.  *.*****..*::**:** ****:*** **

AT4G15248.1     HSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI-------RMIARIEEHSSDH-
pt003435_POPTR_ HGANFLALRHVRNMLCNTCQNLTQRCLIGASTEVMLSTIVSWRERRDRNSNLEKKCSGSL
pt037451_POPTR_ HGANFLAQRHVRCMLCNTCQNLTQRYLIGASTELLLPTIVSWRERRQCNSNLEKKSSGSL
                *.***** **:* ::*.**::**:* *:* . :::*. *          :.:*::.*.  

AT4G15248.1     KIPFVFL
pt003435_POPTR_ KKPFSFL
pt037451_POPTR_ KMPFLFL
                * ** **
BoxShade v3.31 C (beta, 970507) Output
AT4G15248.1     M C R G F E K E E E R R S D N G G C Q R L C T E S H K A P - - V S C E L C G E N A T V Y C E A D A A F L C R K C D R W V
pt003435_POPTR_    M C R G - - - N Q E R S N Q G S S C N K E A V S P N A T S R F V C C E L C G S R A T L Y C Q A D H A F L C Q K C D G W V
pt037451_POPTR_    M C R G I - - H Q E R N N Q G G S C G E E V V S S K A T S R L V C C E L C G S R A S L Y C Q A D D A F L C Q K C D K W V
 
AT4G15248.1     H S A N F L A R R H L R R V I C T T C R K L T R R C L V G D N F N V V L P E I - - - - - - - R M I A R I E E H S S D H -
pt003435_POPTR_    H G A N F L A L R H V R N M L C N T C Q N L T Q R C L I G A S T E V M L S T I V S W R E R R D R N S N L E K K C S G S L
pt037451_POPTR_    H G A N F L A Q R H V R C M L C N T C Q N L T Q R Y L I G A S T E L L L P T I V S W R E R R Q C N S N L E K K S S G S L
 
AT4G15248.1     K I P F V F L
pt003435_POPTR_    K K P F S F L
pt037451_POPTR_    K M P F L F L
 
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