fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G15248.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037731 not found in 124aa AT4G15248.1 1st_1st 0.392857142 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G15248.1     MCRGFEKEEERRSDNGGC----QRLCTESHKAPVSCELCGENATVYCEADAAFLCRKCDR
gm037731_Glyma1 MCKGAEGEKQ----HGFCSSYLHKEC--ATRSATCCELCGLQASLYCQADDAYLCRKCDK
                **:* * *::    :* *    :: *  : ::...***** :*::**:** *:******:

AT4G15248.1     WVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI---------------RMIA
gm037731_Glyma1 RVHEANFLALRHIRCFLCNTCQNLTRRYLIGASIEVVLPANINWTIGNLPSNRGIHRKCS
                 **.***** **:* .:*.**::**** *:* .::****                 *  :

AT4G15248.1     RIEEHSSDHKIPFVFL
gm037731_Glyma1 RMHNNLS------LLL
                *:.:: *      ::*
BoxShade v3.31 C (beta, 970507) Output
AT4G15248.1     M C R G F E K E E E R R S D N G G C - - - - Q R L C T E S H K A P V S C E L C G E N A T V Y C E A D A A F L C R K C D R
gm037731_Glyma1    M C K G A E G E K Q - - - - H G F C S S Y L H K E C - - A T R S A T C C E L C G L Q A S L Y C Q A D D A Y L C R K C D K
 
AT4G15248.1     W V H S A N F L A R R H L R R V I C T T C R K L T R R C L V G D N F N V V L P E I - - - - - - - - - - - - - - - R M I A
gm037731_Glyma1    R V H E A N F L A L R H I R C F L C N T C Q N L T R R Y L I G A S I E V V L P A N I N W T I G N L P S N R G I H R K C S
 
AT4G15248.1     R I E E H S S D H K I P F V F L
gm037731_Glyma1    R M H N N L S - - - - - - L L L
 
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