Input
| Putative repression domain
|
|
AT4G16110.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt042456 |
not found in 670aa |
AT4G16110.1 |
1st_1st |
0.475767366 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G16110.1 MVNPGHGRGPDSGTAAGG------SNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRV
pt042456_POPTR_ MMNLANCKGSMSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEV
*:* .: :*. * :::** . ** ***.*************:***:** ** *.*
AT4G16110.1 TKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSV
pt042456_POPTR_ TKCNRAEIALSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNV
******* ******:****:*******************::***************.*.*
AT4G16110.1 VLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQH
pt042456_POPTR_ VMKGVTHGACDYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQS-GSVEEGG---DRQQKQ
*:******* ******:***************::***: *:* **:*: * ****::
AT4G16110.1 REDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVN
pt042456_POPTR_ PEDAD-YSSSANEGSWKNSKRRKDEE--EEAEERDDTSALKKPRVVWSVELHQQFVAAVN
**** ***.***. :.*::**:** ::.::::*:*:*********************
AT4G16110.1 QLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQ
pt042456_POPTR_ QLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGMGSSFISPQEA
***:**********:*******************:*****.******..*. **:: *:
AT4G16110.1 SFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAKPGMSVSPLVDQRSIFNFE
pt042456_POPTR_ TYGPLSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRST-AKPRMPM-PIVDQRNLFSFE
::********:***:**.:****.**** ********.* *** *.: *:****.:*.**
AT4G16110.1 NPKIRFGDGHGQTMNNG---NLLHGVPTGSHMRLRPGQ--NVQSSG--MMLPVADQLPRG
pt042456_POPTR_ NPKLRFGEGQQQHLNNGKQTNLLHGIPT----TMEPKQLANLHHSAHSLLMQMSQQQSRG
***:***:*: * :*** *****:** :.* * *:: *. ::: :::* .**
AT4G16110.1 G----------PSMLPSLGQQPILSSSVSRRSDLTGALAVRNSIPETNSRVL---PTTH-
pt042456_POPTR_ QILNETTHSHVPRLSSSIG-QPIASNALA-----SGVLT-RNGLAE-NGRGIGFNPVSQS
* : .*:* *** *.::: :*.*: **.:.* *.* : *.::
AT4G16110.1 SVFNNFP----ADLPRSSFPLASAPGI-SVPVSVSYQEEVNSSDAKGGSSAATAGFGNPS
pt042456_POPTR_ STLLNFPLNTTAELTATSFPLGSAAEVPSLTSKGTFQEEI-SSEIKG-----TGGF-MPS
*.: *** *:*. :****.**. : *:. . ::***: **: ** *.** **
AT4G16110.1 YDIFNDFPQHQQHNKNISNKLNDWDLRNMGLVFSSNQDAATATATAAFSTS----EAYSS
pt042456_POPTR_ YDIFSDLQQHRSH---------DWELQNVGMTFNGSQQSNSVQSNLDVAPSVLSHQGFSS
****.*: **:.* **:*:*:*:.*...*:: :. :. .:.* :.:**
AT4G16110.1 SSTQRKRRETDATVVG----------EH--GQNLQSPSRNLYHLNHVFMDGGSVRVKSER
pt042456_POPTR_ CQSNGQSR-NNISVVGKPMFSAGDATEHVNAQSLEHPINTFFAEN-------SMRVKTER
..:: : * .: :*** ** .*.*: * ..:: * *:***:**
AT4G16110.1 VAETVTCPPANTLFHEQYNQEDLMSAFLKQE------GIPSVDNEFEFDGYSIDNIQV
pt042456_POPTR_ VPDA---NPQTALFNGQFGQEDLMSALLKQQQQQQQGGIGLAENEFDFDGYSLDNIPV
*.:: * .:**: *:.*******:***: ** .:***:*****:*** *
BoxShade v3.31 C (beta, 970507) Output
AT4G16110.1 |
M |
V |
N |
P |
G |
H |
G |
R |
G |
P |
D |
S |
G |
T |
A |
A |
G |
G |
- |
- |
- |
- |
- |
- |
S |
N |
S |
D |
P |
F |
P |
A |
N |
L |
R |
V |
L |
V |
V |
D |
D |
D |
P |
T |
C |
L |
M |
I |
L |
E |
R |
M |
L |
M |
T |
C |
L |
Y |
R |
V |
pt042456_POPTR_ |
M |
M |
N |
L |
A |
N |
C |
K |
G |
S |
M |
S |
T |
A |
T |
S |
G |
G |
V |
W |
K |
A |
S |
D |
G |
A |
S |
D |
Q |
F |
P |
A |
G |
L |
R |
V |
L |
V |
V |
D |
D |
D |
P |
T |
C |
L |
V |
I |
L |
E |
K |
M |
L |
R |
T |
C |
R |
Y |
E |
V |
|
AT4G16110.1 |
T |
K |
C |
N |
R |
A |
E |
S |
A |
L |
S |
L |
L |
R |
K |
N |
K |
N |
G |
F |
D |
I |
V |
I |
S |
D |
V |
H |
M |
P |
D |
M |
D |
G |
F |
K |
L |
L |
E |
H |
V |
G |
L |
E |
M |
D |
L |
P |
V |
I |
M |
M |
S |
A |
D |
D |
S |
K |
S |
V |
pt042456_POPTR_ |
T |
K |
C |
N |
R |
A |
E |
I |
A |
L |
S |
L |
L |
R |
E |
N |
K |
N |
G |
Y |
D |
I |
V |
I |
S |
D |
V |
H |
M |
P |
D |
M |
D |
G |
F |
K |
L |
L |
E |
Q |
I |
G |
L |
E |
M |
D |
L |
P |
V |
I |
M |
M |
S |
A |
D |
D |
G |
K |
N |
V |
|
AT4G16110.1 |
V |
L |
K |
G |
V |
T |
H |
G |
A |
V |
D |
Y |
L |
I |
K |
P |
V |
R |
I |
E |
A |
L |
K |
N |
I |
W |
Q |
H |
V |
V |
R |
K |
K |
R |
N |
E |
W |
N |
V |
S |
E |
H |
S |
G |
G |
S |
I |
E |
D |
T |
G |
G |
D |
R |
D |
R |
Q |
Q |
Q |
H |
pt042456_POPTR_ |
V |
M |
K |
G |
V |
T |
H |
G |
A |
C |
D |
Y |
L |
I |
K |
P |
I |
R |
I |
E |
A |
L |
K |
N |
I |
W |
Q |
H |
V |
V |
R |
K |
R |
K |
N |
E |
W |
K |
D |
L |
E |
Q |
S |
- |
G |
S |
V |
E |
E |
G |
G |
- |
- |
- |
D |
R |
Q |
Q |
K |
Q |
|
AT4G16110.1 |
R |
E |
D |
A |
D |
N |
N |
S |
S |
S |
V |
N |
E |
G |
N |
G |
R |
S |
S |
R |
K |
R |
K |
E |
E |
E |
V |
D |
D |
Q |
G |
D |
D |
K |
E |
D |
S |
S |
S |
L |
K |
K |
P |
R |
V |
V |
W |
S |
V |
E |
L |
H |
Q |
Q |
F |
V |
A |
A |
V |
N |
pt042456_POPTR_ |
P |
E |
D |
A |
D |
- |
Y |
S |
S |
S |
A |
N |
E |
G |
S |
W |
K |
N |
S |
K |
R |
R |
K |
D |
E |
E |
- |
- |
E |
E |
A |
E |
E |
R |
D |
D |
T |
S |
A |
L |
K |
K |
P |
R |
V |
V |
W |
S |
V |
E |
L |
H |
Q |
Q |
F |
V |
A |
A |
V |
N |
|
AT4G16110.1 |
Q |
L |
G |
V |
D |
K |
A |
V |
P |
K |
K |
I |
L |
E |
M |
M |
N |
V |
P |
G |
L |
T |
R |
E |
N |
V |
A |
S |
H |
L |
Q |
K |
Y |
R |
I |
Y |
L |
R |
R |
L |
G |
G |
V |
S |
Q |
H |
Q |
G |
N |
M |
N |
H |
S |
F |
M |
T |
G |
Q |
D |
Q |
pt042456_POPTR_ |
Q |
L |
G |
I |
D |
K |
A |
V |
P |
K |
K |
I |
L |
E |
L |
M |
N |
V |
P |
G |
L |
T |
R |
E |
N |
V |
A |
S |
H |
L |
Q |
K |
Y |
R |
L |
Y |
L |
R |
R |
L |
S |
G |
V |
S |
Q |
H |
Q |
N |
G |
M |
G |
S |
S |
F |
I |
S |
P |
Q |
E |
A |
|
AT4G16110.1 |
S |
F |
G |
P |
L |
S |
S |
L |
N |
G |
F |
D |
L |
Q |
S |
L |
A |
V |
T |
G |
Q |
L |
P |
P |
Q |
S |
L |
A |
Q |
L |
Q |
A |
A |
G |
L |
G |
R |
P |
T |
L |
A |
K |
P |
G |
M |
S |
V |
S |
P |
L |
V |
D |
Q |
R |
S |
I |
F |
N |
F |
E |
pt042456_POPTR_ |
T |
Y |
G |
P |
L |
S |
S |
L |
N |
G |
L |
D |
L |
Q |
T |
L |
A |
T |
A |
G |
Q |
L |
P |
A |
Q |
S |
L |
A |
T |
L |
Q |
A |
A |
G |
L |
G |
R |
S |
T |
- |
A |
K |
P |
R |
M |
P |
M |
- |
P |
I |
V |
D |
Q |
R |
N |
L |
F |
S |
F |
E |
|
AT4G16110.1 |
N |
P |
K |
I |
R |
F |
G |
D |
G |
H |
G |
Q |
T |
M |
N |
N |
G |
- |
- |
- |
N |
L |
L |
H |
G |
V |
P |
T |
G |
S |
H |
M |
R |
L |
R |
P |
G |
Q |
- |
- |
N |
V |
Q |
S |
S |
G |
- |
- |
M |
M |
L |
P |
V |
A |
D |
Q |
L |
P |
R |
G |
pt042456_POPTR_ |
N |
P |
K |
L |
R |
F |
G |
E |
G |
Q |
Q |
Q |
H |
L |
N |
N |
G |
K |
Q |
T |
N |
L |
L |
H |
G |
I |
P |
T |
- |
- |
- |
- |
T |
M |
E |
P |
K |
Q |
L |
A |
N |
L |
H |
H |
S |
A |
H |
S |
L |
L |
M |
Q |
M |
S |
Q |
Q |
Q |
S |
R |
G |
|
AT4G16110.1 |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
S |
M |
L |
P |
S |
L |
G |
Q |
Q |
P |
I |
L |
S |
S |
S |
V |
S |
R |
R |
S |
D |
L |
T |
G |
A |
L |
A |
V |
R |
N |
S |
I |
P |
E |
T |
N |
S |
R |
V |
L |
- |
- |
- |
P |
T |
T |
H |
- |
pt042456_POPTR_ |
Q |
I |
L |
N |
E |
T |
T |
H |
S |
H |
V |
P |
R |
L |
S |
S |
S |
I |
G |
- |
Q |
P |
I |
A |
S |
N |
A |
L |
A |
- |
- |
- |
- |
- |
S |
G |
V |
L |
T |
- |
R |
N |
G |
L |
A |
E |
- |
N |
G |
R |
G |
I |
G |
F |
N |
P |
V |
S |
Q |
S |
|
AT4G16110.1 |
S |
V |
F |
N |
N |
F |
P |
- |
- |
- |
- |
A |
D |
L |
P |
R |
S |
S |
F |
P |
L |
A |
S |
A |
P |
G |
I |
- |
S |
V |
P |
V |
S |
V |
S |
Y |
Q |
E |
E |
V |
N |
S |
S |
D |
A |
K |
G |
G |
S |
S |
A |
A |
T |
A |
G |
F |
G |
N |
P |
S |
pt042456_POPTR_ |
S |
T |
L |
L |
N |
F |
P |
L |
N |
T |
T |
A |
E |
L |
T |
A |
T |
S |
F |
P |
L |
G |
S |
A |
A |
E |
V |
P |
S |
L |
T |
S |
K |
G |
T |
F |
Q |
E |
E |
I |
- |
S |
S |
E |
I |
K |
G |
- |
- |
- |
- |
- |
T |
G |
G |
F |
- |
M |
P |
S |
|
AT4G16110.1 |
Y |
D |
I |
F |
N |
D |
F |
P |
Q |
H |
Q |
Q |
H |
N |
K |
N |
I |
S |
N |
K |
L |
N |
D |
W |
D |
L |
R |
N |
M |
G |
L |
V |
F |
S |
S |
N |
Q |
D |
A |
A |
T |
A |
T |
A |
T |
A |
A |
F |
S |
T |
S |
- |
- |
- |
- |
E |
A |
Y |
S |
S |
pt042456_POPTR_ |
Y |
D |
I |
F |
S |
D |
L |
Q |
Q |
H |
R |
S |
H |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
W |
E |
L |
Q |
N |
V |
G |
M |
T |
F |
N |
G |
S |
Q |
Q |
S |
N |
S |
V |
Q |
S |
N |
L |
D |
V |
A |
P |
S |
V |
L |
S |
H |
Q |
G |
F |
S |
S |
|
AT4G16110.1 |
S |
S |
T |
Q |
R |
K |
R |
R |
E |
T |
D |
A |
T |
V |
V |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
H |
- |
- |
G |
Q |
N |
L |
Q |
S |
P |
S |
R |
N |
L |
Y |
H |
L |
N |
H |
V |
F |
M |
D |
G |
G |
S |
V |
R |
V |
K |
S |
E |
R |
pt042456_POPTR_ |
C |
Q |
S |
N |
G |
Q |
S |
R |
- |
N |
N |
I |
S |
V |
V |
G |
K |
P |
M |
F |
S |
A |
G |
D |
A |
T |
E |
H |
V |
N |
A |
Q |
S |
L |
E |
H |
P |
I |
N |
T |
F |
F |
A |
E |
N |
- |
- |
- |
- |
- |
- |
- |
S |
M |
R |
V |
K |
T |
E |
R |
|
AT4G16110.1 |
V |
A |
E |
T |
V |
T |
C |
P |
P |
A |
N |
T |
L |
F |
H |
E |
Q |
Y |
N |
Q |
E |
D |
L |
M |
S |
A |
F |
L |
K |
Q |
E |
- |
- |
- |
- |
- |
- |
G |
I |
P |
S |
V |
D |
N |
E |
F |
E |
F |
D |
G |
Y |
S |
I |
D |
N |
I |
Q |
V |
pt042456_POPTR_ |
V |
P |
D |
A |
- |
- |
- |
N |
P |
Q |
T |
A |
L |
F |
N |
G |
Q |
F |
G |
Q |
E |
D |
L |
M |
S |
A |
L |
L |
K |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
G |
G |
I |
G |
L |
A |
E |
N |
E |
F |
D |
F |
D |
G |
Y |
S |
L |
D |
N |
I |
P |
V |
|
|