fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G16750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029884 not found in 252aa AT2G44940.1 1st_not 0.462908011 II
Pt010682 not found in 225aa AT4G16750.1 not_1st 0.459940652 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G16750.1     -------------------------------MQDSSSH-ESQ-RNLRSPVPEKTGKSSKT
pt029884_POPTR_ METSLNIQCDAQTSAFSSSSITSSFSSFPSPMKNSRKQDQSQDSSKRNQDPKNNNESNKK
pt010682_POPTR_ -------------------------------MKDSTKQ-VSQNSSKRNQDP-NNYESDKQ
                                               *::* .:  **  . *.  * :. :*.* 

AT4G16750.1     KNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIK
pt029884_POPTR_ AKSGGNAGRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFPTPEMAARAHDVAALTIK
pt010682_POPTR_ AKRRGNAGRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFSTPEMAARAHDVAALTIK
                 :   ...::*.:****************:*:**********.**************:**

AT4G16750.1     GGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKA---------------PESPS
pt029884_POPTR_ GHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLSCKTSPKGRETEAEDELMLPHSPD
pt010682_POPTR_ GHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLSCKTSQKGRETEAEAELMLPRSLD
                * **********:.:*****:.***** *** **::. *:               *.* .

AT4G16750.1     STVTS---------SPV---ADDAFSDLPDLLLD----------------VNDHNKNDGF
pt029884_POPTR_ STLASNETQEYSLSSPLRDDGDDTFIDLPDILQD-QYQFDEFCYLSSWQLVGPETSDIGF
pt010682_POPTR_ STLASNETQEYSLNSPLRDDDDDTFIDLPDILQGISHQFDEFCYLSPWQPVGTETSDVGF
                **::*         **:    **:* ****:* .                *. ...: **

AT4G16750.1     WDSFPYEDPFF-----LENY---
pt029884_POPTR_ WH---QEEP-------FGNIPFK
pt010682_POPTR_ WH---HEEPSLWEYQSSRNIY--
                *.    *:*         *
BoxShade v3.31 C (beta, 970507) Output
AT4G16750.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q D S S S H - E S Q - R N L R S P V P E K T G K S S K T
pt029884_POPTR_    M E T S L N I Q C D A Q T S A F S S S S I T S S F S S F P S P M K N S R K Q D Q S Q D S S K R N Q D P K N N N E S N K K
pt010682_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K D S T K Q - V S Q N S S K R N Q D P - N N Y E S D K Q
 
AT4G16750.1     K N E Q K G V S K Q P N F R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D V A A L A I K
pt029884_POPTR_    A K S G G N A G R H P S Y R G V R M R Q W G K W V S E I R Q P K K K S R I W L G T F P T P E M A A R A H D V A A L T I K
pt010682_POPTR_    A K R R G N A G R H P S Y R G V R M R Q W G K W V S E I R Q P K K K S R I W L G T F S T P E M A A R A H D V A A L T I K
 
AT4G16750.1     G G S A H L N F P E L A Y H L P R P A S A D P K D I Q E A A A A A A A V D W K A - - - - - - - - - - - - - - - P E S P S
pt029884_POPTR_    G H S A H L N F P E L A H E F P R P A S S S P K D I Q A A A A L A A T L S C K T S P K G R E T E A E D E L M L P H S P D
pt010682_POPTR_    G H S A H L N F P E L A H E F P R P A S S S P K D I Q A A A A L A A T L S C K T S Q K G R E T E A E A E L M L P R S L D
 
AT4G16750.1     S T V T S - - - - - - - - - S P V - - - A D D A F S D L P D L L L D - - - - - - - - - - - - - - - - V N D H N K N D G F
pt029884_POPTR_    S T L A S N E T Q E Y S L S S P L R D D G D D T F I D L P D I L Q D - Q Y Q F D E F C Y L S S W Q L V G P E T S D I G F
pt010682_POPTR_    S T L A S N E T Q E Y S L N S P L R D D D D D T F I D L P D I L Q G I S H Q F D E F C Y L S P W Q P V G T E T S D V G F
 
AT4G16750.1     W D S F P Y E D P F F - - - - - L E N Y - - -
pt029884_POPTR_    W H - - - Q E E P - - - - - - - F G N I P F K
pt010682_POPTR_    W H - - - H E E P S L W E Y Q S S R N I Y - -
 
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