fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G16750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009088 LPDLLLDLRYGPPSSGLS in 180/225 AT2G44940.1 1st_not 0.459940652 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G16750.1     MQDSS----SHESQRNLRSPV-PEKTGKSS------KTKNEQKGVSKQPNFRGVRMRQWG
Os009088_Os02t0 MDDSSFGSEPTTSSSGGEAPASPPSTASSSSDGAGGKKKRPRKD-GHHPTYRGVRMRSWG
                *:***    .  *. . .:*. * .*..**      *.*. :*. .::*.:******.**

AT4G16750.1     KWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASAD
Os009088_Os02t0 KWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGRAAHLNFPDLAHELPRPATAA
                ********************:*.**************** :******:**:.*****:* 

AT4G16750.1     PKDIQEAAAAAAAVDWKAPES------------PSSTVTSSP-----VADDAFSDLPDLL
Os009088_Os02t0 PKDVQAAAALAAAADFPASSANAGASNNPDGSDDASAGSASPPPPPDAADDALFDLPDLL
                ***:* *** ***.*: *..:             :*: ::**     .****: ******

AT4G16750.1     LDVNDHNKNDGF-----WDS---------------FPYEDPFFLENY
Os009088_Os02t0 LDLRYGPPSSGLSCASSWEDEVGLISGAGAAAAGVFRLEEPLLWEY-
                **:.    ..*:     *:.               *  *:*:: *
BoxShade v3.31 C (beta, 970507) Output
AT4G16750.1     M Q D S S - - - - S H E S Q R N L R S P V - P E K T G K S S - - - - - - K T K N E Q K G V S K Q P N F R G V R M R Q W G
Os009088_Os02t0    M D D S S F G S E P T T S S S G G E A P A S P P S T A S S S S D G A G G K K K R P R K D - G H H P T Y R G V R M R S W G
 
AT4G16750.1     K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D V A A L A I K G G S A H L N F P E L A Y H L P R P A S A D
Os009088_Os02t0    K W V S E I R E P R K K S R I W L G T F A T A E M A A R A H D V A A L A I K G R A A H L N F P D L A H E L P R P A T A A
 
AT4G16750.1     P K D I Q E A A A A A A A V D W K A P E S - - - - - - - - - - - - P S S T V T S S P - - - - - V A D D A F S D L P D L L
Os009088_Os02t0    P K D V Q A A A A L A A A A D F P A S S A N A G A S N N P D G S D D A S A G S A S P P P P P D A A D D A L F D L P D L L
 
AT4G16750.1     L D V N D H N K N D G F - - - - - W D S - - - - - - - - - - - - - - - F P Y E D P F F L E N Y
Os009088_Os02t0    L D L R Y G P P S S G L S C A S S W E D E V G L I S G A G A A A A G V F R L E E P L L W E Y -
 
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