fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G16750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047086 FLDLPDLSLDLSHGAD in 191/232 AT5G11590.1 1st_not 0.483679525 II
Gm029710 not found in 149aa AT4G16750.1 not_1st 0.403560830 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G16750.1     --MQDS---------SSHESQRNLRSP-------VPEKTGKSSKTKNEQKGVS----KQP
gm029710_Glyma1 ------------------------------------------------------------
gm047086_Glyma1 MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTTKEKKKKRAISNIEGKHP
                                                                            

AT4G16750.1     NFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPEL
gm029710_Glyma1 ------MRKWGKWVSEIREPKKKSRIWLGSFSTPEMAARAHDVAALTIKGTSAFLNFPEL
gm047086_Glyma1 TYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPEL
                      **:***********:********:*.**:***********:*** **.******

AT4G16750.1     AYHLPRPASADPKDIQEAAAAAAAVDW-------------------KAPESPSSTVTSSP
gm029710_Glyma1 ASHLPRPLTTSPKDIQAAAAKAAALNF-----EAQVE-AQA-----QAQLSIPSSSSE--
gm047086_Glyma1 AAKLPRPASTSPKDIQAAAAKASALDFGHQSHEAESELSQAVSSSIQTQSSSSSSNSSLK
                * :**** ::.***** *** *:*:::                   ::  * .*: :.  

AT4G16750.1     VADDAFSDLPDLLLDVNDHNKNDGFWDS-------------FPYEDPFF--LENY
gm029710_Glyma1 ------VEFPDLLLDSS-HSAGEFDYSAPWLVAEAEHLDLAFRLDDPPFPAWGSY
gm047086_Glyma1 GVDDTFLDLPDLSLDLS-HGADEFHYSSAWLVAGAEHIELGFRLEEPFL--WESY
                       ::*** ** . *. .:  :.:             *  ::* :    .*
BoxShade v3.31 C (beta, 970507) Output
AT4G16750.1     - - M Q D S - - - - - - - - - S S H E S Q R N L R S P - - - - - - - V P E K T G K S S K T K N E Q K G V S - - - - K Q P
gm029710_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047086_Glyma1    M V M E E S N P L D N E V Q P T T S S S S F T I T T P S T S S S S S I E E A T N T T T K E K K K K R A I S N I E G K H P
 
AT4G16750.1     N F R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D V A A L A I K G G S A H L N F P E L
gm029710_Glyma1    - - - - - - M R K W G K W V S E I R E P K K K S R I W L G S F S T P E M A A R A H D V A A L T I K G T S A F L N F P E L
gm047086_Glyma1    T Y R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F P E L
 
AT4G16750.1     A Y H L P R P A S A D P K D I Q E A A A A A A A V D W - - - - - - - - - - - - - - - - - - - K A P E S P S S T V T S S P
gm029710_Glyma1    A S H L P R P L T T S P K D I Q A A A A K A A A L N F - - - - - E A Q V E - A Q A - - - - - Q A Q L S I P S S S S E - -
gm047086_Glyma1    A A K L P R P A S T S P K D I Q A A A A K A S A L D F G H Q S H E A E S E L S Q A V S S S I Q T Q S S S S S S N S S L K
 
AT4G16750.1     V A D D A F S D L P D L L L D V N D H N K N D G F W D S - - - - - - - - - - - - - F P Y E D P F F - - L E N Y
gm029710_Glyma1    - - - - - - V E F P D L L L D S S - H S A G E F D Y S A P W L V A E A E H L D L A F R L D D P P F P A W G S Y
gm047086_Glyma1    G V D D T F L D L P D L S L D L S - H G A D E F H Y S S A W L V A G A E H I E L G F R L E E P F L - - W E S Y
 
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