fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G16780.1 MFEKDDLGLSLGLNFP at 6/284 in AT4G16780.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011704 MAEKEDLGLSLSLSVP in 8/305 AT4G16780.1 not_1st 0.669960474 II
Pt032091 MAGKEDLGLSLSLSVP in 7/302 AT4G16780.1 not_1st 0.660079051 II
QNQHSLQLNLMPSLV in 22/302
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G16780.1     -MMFEKDDLGLSLGLNFPKKQINLKSNPSVSVTPSSSSFGLF----RRSSWNESFTSSVP
pt011704_POPTR_ MMMAEKEDLGLSLSLSVPQNQHSLQFNLMPSLVPSTAASSLSGFNPQKPSWNATFPPSDQ
pt032091_POPTR_ -MMAGKEDLGLSLSLSVPQNQHSLQLNLMPSLVPSTASSSLSGFHPQKPSWNVTFPSSDP
                 **  *:******.*..*::* .*: *   *:.**::: .*     ::.*** :*..*  

AT4G16780.1     NSDSSQKETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSER------EED
pt011704_POPTR_ NSDPYRAETRSFLRGIDVNRLPSTADC-EEEAGVSSPNSTISSISGKRSEREGINGEEHE
pt032091_POPTR_ NSNSYRAETRSLLRGIDVNRLPSTADC-EEEAGVSSPNSTISSISGKRSEREGINGDEHE
                **:. : ***:::******* ****:  :*:*********:** :******      *.:

AT4G16780.1     TDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQ
pt011704_POPTR_ MERDYSRGISDEEDGDTSRKKLRLSKDQAAILEESFKEHNTLNPKQKMALAKQLGLRPRQ
pt032091_POPTR_ MERASSHGISDEEDGETSRKKLRLSKDQAAILEESFKEHNTLNPKQKMALAKQLGLRPRQ
                 :   *:****:***:.***********:*****:**:*.******* *********.**

AT4G16780.1     VEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSP
pt011704_POPTR_ VEVWFQNRRARTKLKQTEVDCEFLKRCCENLTAENRRLQKEVQELRALKLSPQFYMQMTP
pt032091_POPTR_ VEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTP
                ************************:******* ********* *************:*:*

AT4G16780.1     PTTLTMCPSCEHVSVPP---------PQPQAATS-AHHRSLPVNAWAPATRISHGLT-FD
pt011704_POPTR_ PTTLTMCPSCERVAVPPSASSTVDARSHPHMGPTPPHHRPIPINPWAPAAPITRGPTPFD
pt032091_POPTR_ PTTLTMCPSCERVAAPPTASSTVDARPHPHIGPT--RHRPVPMNPWAPAAPVTRGPTPFD
                ***********:*:.**         .:*: ..:  :**.:*:*.****: :::* * **

AT4G16780.1     ALRPRS
pt011704_POPTR_ VLRPRS
pt032091_POPTR_ AIRPRS
                .:****
BoxShade v3.31 C (beta, 970507) Output
AT4G16780.1     - M M F E K D D L G L S L G L N F P K K Q I N L K S N P S V S V T P S S S S F G L F - - - - R R S S W N E S F T S S V P
pt011704_POPTR_    M M M A E K E D L G L S L S L S V P Q N Q H S L Q F N L M P S L V P S T A A S S L S G F N P Q K P S W N A T F P P S D Q
pt032091_POPTR_    - M M A G K E D L G L S L S L S V P Q N Q H S L Q L N L M P S L V P S T A S S S L S G F H P Q K P S W N V T F P S S D P
 
AT4G16780.1     N S D S S Q K E T R T F I R G I D V N R P P S T A E Y G D E D A G V S S P N S T V S S S T G K R S E R - - - - - - E E D
pt011704_POPTR_    N S D P Y R A E T R S F L R G I D V N R L P S T A D C - E E E A G V S S P N S T I S S I S G K R S E R E G I N G E E H E
pt032091_POPTR_    N S N S Y R A E T R S L L R G I D V N R L P S T A D C - E E E A G V S S P N S T I S S I S G K R S E R E G I N G D E H E
 
AT4G16780.1     T D P Q G S R G I S D D E D G D N S R K K L R L S K D Q S A I L E E T F K D H S T L N P K Q K Q A L A K Q L G L R A R Q
pt011704_POPTR_    M E R D Y S R G I S D E E D G D T S R K K L R L S K D Q A A I L E E S F K E H N T L N P K Q K M A L A K Q L G L R P R Q
pt032091_POPTR_    M E R A S S H G I S D E E D G E T S R K K L R L S K D Q A A I L E E S F K E H N T L N P K Q K M A L A K Q L G L R P R Q
 
AT4G16780.1     V E V W F Q N R R A R T K L K Q T E V D C E F L R R C C E N L T E E N R R L Q K E V T E L R A L K L S P Q F Y M H M S P
pt011704_POPTR_    V E V W F Q N R R A R T K L K Q T E V D C E F L K R C C E N L T A E N R R L Q K E V Q E L R A L K L S P Q F Y M Q M T P
pt032091_POPTR_    V E V W F Q N R R A R T K L K Q T E V D C E F L K R C C E N L T E E N R R L Q K E V Q E L R A L K L S P Q F Y M Q M T P
 
AT4G16780.1     P T T L T M C P S C E H V S V P P - - - - - - - - - P Q P Q A A T S - A H H R S L P V N A W A P A T R I S H G L T - F D
pt011704_POPTR_    P T T L T M C P S C E R V A V P P S A S S T V D A R S H P H M G P T P P H H R P I P I N P W A P A A P I T R G P T P F D
pt032091_POPTR_    P T T L T M C P S C E R V A A P P T A S S T V D A R P H P H I G P T - - R H R P V P M N P W A P A A P V T R G P T P F D
 
AT4G16780.1     A L R P R S
pt011704_POPTR_    V L R P R S
pt032091_POPTR_    A I R P R S
 
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