fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G16780.1 MFEKDDLGLSLGLNFP at 6/284 in AT4G16780.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os037033 DEQYGGLRLGLGLGLS in 15/311 AT2G44910.1 not_not 0.411067193 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G16780.1     --MMF--EKDD------LGLSLGLNF---------------------PKKQINLKSNPSV
Os037033_Os10t0 MEMMVHGRRDEQYGGLRLGLGLGLSLGVAGGAADDEQPPPRRGAAPPPQQQL--------
                  **.  .:*:      ***.***.:                     *::*:        

AT4G16780.1     SVTPSSSSFGLFRRSSWNES--FTSSVPNSDSSQKETRT------------FIRGIDVNR
Os037033_Os10t0 --------------CGWNGGGLFSSS-----SSDHRGRSAMMACHDVIEMPFLRGIDVNR
                              ..** .  *:**     **::. *:            *:*******

AT4G16780.1     PP-----STAEYG------DEDAGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDED-
Os037033_Os10t0 APAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSAAT--AAAAAASDDEDS
                .*     :*:  *      **:.*.******:** :***.  .  *   .: . ***** 

AT4G16780.1     GDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKL
Os037033_Os10t0 GGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKL
                *..***********:*:**:***:*.******* ***:**.*:.****************

AT4G16780.1     KQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKL-----SPQ--FYMHMSPPTTLTMC
Os037033_Os10t0 KQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMC
                ********:*:****.**:*****::*: *******     :*:  :  ::.********

AT4G16780.1     PSCEHVSVPPPQPQAATSAHH-------RSLPVNAWAPATRISHGLTFDALRPRS
Os037033_Os10t0 PSCERVA------SAATTTRNNSGAAPARPVPTRPWPPAA---------AQRSSA
                ****:*:      .***::::       *.:*...*.**:         * *. :
BoxShade v3.31 C (beta, 970507) Output
AT4G16780.1     - - M M F - - E K D D - - - - - - L G L S L G L N F - - - - - - - - - - - - - - - - - - - - - P K K Q I N L K S N P S V
Os037033_Os10t0    M E M M V H G R R D E Q Y G G L R L G L G L G L S L G V A G G A A D D E Q P P P R R G A A P P P Q Q Q L - - - - - - - -
 
AT4G16780.1     S V T P S S S S F G L F R R S S W N E S - - F T S S V P N S D S S Q K E T R T - - - - - - - - - - - - F I R G I D V N R
Os037033_Os10t0    - - - - - - - - - - - - - - C G W N G G G L F S S S - - - - - S S D H R G R S A M M A C H D V I E M P F L R G I D V N R
 
AT4G16780.1     P P - - - - - S T A E Y G - - - - - - D E D A G V S S P N S T V S S S T G K R S E R E E D T D P Q G S R G I S D D E D -
Os037033_Os10t0    A P A A E T T T T T A R G P S C S E E D E E P G A S S P N S T L S S L S G K R G A P S A A T - - A A A A A A S D D E D S
 
AT4G16780.1     G D N S R K K L R L S K D Q S A I L E E T F K D H S T L N P K Q K Q A L A K Q L G L R A R Q V E V W F Q N R R A R T K L
Os037033_Os10t0    G G G S R K K L R L S K D Q A A V L E D T F K E H N T L N P K Q K A A L A R Q L N L K P R Q V E V W F Q N R R A R T K L
 
AT4G16780.1     K Q T E V D C E F L R R C C E N L T E E N R R L Q K E V T E L R A L K L - - - - - S P Q - - F Y M H M S P P T T L T M C
Os037033_Os10t0    K Q T E V D C E L L K R C C E T L T D E N R R L H R E L Q E L R A L K L A T A A A A P H H L Y G A R V P P P T T L T M C
 
AT4G16780.1     P S C E H V S V P P P Q P Q A A T S A H H - - - - - - - R S L P V N A W A P A T R I S H G L T F D A L R P R S
Os037033_Os10t0    P S C E R V A - - - - - - S A A T T T R N N S G A A P A R P V P T R P W P P A A - - - - - - - - - A Q R S S A
 
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