fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024008 not found in 736aa AT1G50600.1 1st_not 0.447467166 II
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17230.1     -------------------MQTSQK-------------HHSAAGLHMLYPQVYCSPQFQA
Sb024008_Sorbi1 TSMADTPTSRMVHPFGDVPRQTPKQFLYSGNSQHLCYPYQSASDTHVV-PQRHCTMRSHS
                                    **.::             ::**:. *:: ** :*: : ::

AT4G17230.1     KDNKGFSDIPSKENFFTLESSTASGSLPSYDSPSVSITSGRSPFSPQGSQSCISDLHHSP
Sb024008_Sorbi1 PD-AGSEDHDNHKQ-YTLDSSATSGC-SRHDSP-----SSQSVHAGSGSPVSLEDSHSGS
                 *  * .*  .::: :**:**::**. . :***     *.:* .: .**  .:.* * ..

AT4G17230.1     DNVYGSPLSGVSSLAYDEAGVKSKIRELEVSLLSGDTKVE---EFSGFSPAAGKSWNWDE
Sb024008_Sorbi1 TNGNGSPVSA-SCVTEDPTDLKQKLKDLEAAMLGTDPEIVNSLEISIADQLSLEPEEWKH
                 *  ***:*. *.:: * :.:*.*:::**.::*. *.::    *:*  .  : :. :*..

AT4G17230.1     LLALTPQLDLKEVLVEAARAVADGDFATAYGFLDV----LEQMVSVSGSPIQRLGTYMAE
Sb024008_Sorbi1 MMSM-PGGNLKELLIACARAV---EYNNSYA-IDLMIPELRKKVSVSGEPLERLGAYMVE
                :::: *  :***:*: .****   :: .:*. :*:    *.: *****.*::***:**.*

AT4G17230.1     GLRARLEGSGSNIYKSLKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGET
Sb024008_Sorbi1 GLVARLAASGSSIYKALKCKEPRSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGED
                ** *** .***.***:***:** . :*:*** .*** ***:**.* :**  * **: ** 

AT4G17230.1     RVHIIDFQIAQGSQYMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATL
Sb024008_Sorbi1 RIHIIDFHIAQGAQWISLLQALAARPGGPPFVRITGIDDSVSAYARGGGLELVGRRLSHI
                *:*****:****:*:: *:* ** ******::*:**:*** *:*******.***.**: :

AT4G17230.1     AQSCGVPFEFHDAIMSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLH
Sb024008_Sorbi1 AGLYKVPFQFDAVAISSSEVEEGHLGIVPGEAVAVNFTLELHHIPDETVSTANHRDRILR
                *    ***:*. . :*..:*:. ***: ** **.***.  ***:***:**. *****:*:

AT4G17230.1     LIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHC
Sb024008_Sorbi1 LVKGLSPKVLTLVEQESNTNTAPFAQRFAETLDYYTAIFESIDLALPRDDRERINIEQHC
                *:*.****::***********:** .**.********:***** * ****::**. ****

AT4G17230.1     VARDIVNMIACEESERVERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKAYDKNYK
Sb024008_Sorbi1 LAREIVNLVACEGEERVERHEVFGKWKARLMMAGFRPSPLSALVNATIKTLLQSYSPDYK
                :**:***::*** .********:* *:.*:*****   *:*: .  : . :*::*. :**

AT4G17230.1     LGGHEGALYLFWKRRPMATCSVWKPNPN
Sb024008_Sorbi1 LAERDGVLYLGWKNRPLIVSSAWH----
                *. ::*.*** **.**: ..*.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G17230.1     - - - - - - - - - - - - - - - - - - - M Q T S Q K - - - - - - - - - - - - - H H S A A G L H M L Y P Q V Y C S P Q F Q A
Sb024008_Sorbi1    T S M A D T P T S R M V H P F G D V P R Q T P K Q F L Y S G N S Q H L C Y P Y Q S A S D T H V V - P Q R H C T M R S H S
 
AT4G17230.1     K D N K G F S D I P S K E N F F T L E S S T A S G S L P S Y D S P S V S I T S G R S P F S P Q G S Q S C I S D L H H S P
Sb024008_Sorbi1    P D - A G S E D H D N H K Q - Y T L D S S A T S G C - S R H D S P - - - - - S S Q S V H A G S G S P V S L E D S H S G S
 
AT4G17230.1     D N V Y G S P L S G V S S L A Y D E A G V K S K I R E L E V S L L S G D T K V E - - - E F S G F S P A A G K S W N W D E
Sb024008_Sorbi1    T N G N G S P V S A - S C V T E D P T D L K Q K L K D L E A A M L G T D P E I V N S L E I S I A D Q L S L E P E E W K H
 
AT4G17230.1     L L A L T P Q L D L K E V L V E A A R A V A D G D F A T A Y G F L D V - - - - L E Q M V S V S G S P I Q R L G T Y M A E
Sb024008_Sorbi1    M M S M - P G G N L K E L L I A C A R A V - - - E Y N N S Y A - I D L M I P E L R K K V S V S G E P L E R L G A Y M V E
 
AT4G17230.1     G L R A R L E G S G S N I Y K S L K C N E P T G R E L M S Y M S V L Y E I C P Y W K F A Y T T A N V E I L E A I A G E T
Sb024008_Sorbi1    G L V A R L A A S G S S I Y K A L K C K E P R S S D L L S Y M H F L Y E A C P Y F K F G Y M S A N G A I A E A V K G E D
 
AT4G17230.1     R V H I I D F Q I A Q G S Q Y M F L I Q E L A K R P G G P P L L R V T G V D D S Q S T Y A R G G G L S L V G E R L A T L
Sb024008_Sorbi1    R I H I I D F H I A Q G A Q W I S L L Q A L A A R P G G P P F V R I T G I D D S V S A Y A R G G G L E L V G R R L S H I
 
AT4G17230.1     A Q S C G V P F E F H D A I M S G C K V Q R E H L G L E P G F A V V V N F P Y V L H H M P D E S V S V E N H R D R L L H
Sb024008_Sorbi1    A G L Y K V P F Q F D A V A I S S S E V E E G H L G I V P G E A V A V N F T L E L H H I P D E T V S T A N H R D R I L R
 
AT4G17230.1     L I K S L S P K L V T L V E Q E S N T N T S P F L S R F V E T L D Y Y T A M F E S I D A A R P R D D K Q R I S A E Q H C
Sb024008_Sorbi1    L V K G L S P K V L T L V E Q E S N T N T A P F A Q R F A E T L D Y Y T A I F E S I D L A L P R D D R E R I N I E Q H C
 
AT4G17230.1     V A R D I V N M I A C E E S E R V E R H E V L G I W R V R M M M A G F T G W P V S T S A A F A A S E M L K A Y D K N Y K
Sb024008_Sorbi1    L A R E I V N L V A C E G E E R V E R H E V F G K W K A R L M M A G F R P S P L S A L V N A T I K T L L Q S Y S P D Y K
 
AT4G17230.1     L G G H E G A L Y L F W K R R P M A T C S V W K P N P N
Sb024008_Sorbi1    L A E R D G V L Y L G W K N R P L I V S S A W H - - - -
 
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