fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047103 not found in 251aa AT4G17500.1 not_1st 0.474835886 II
Gm011461 not found in 255aa AT4G17500.1 not_1st 0.463894967 II
Gm029721 not found in 240aa AT4G17500.1 not_1st 0.459518599 II
Pt009912 not found in 280aa AT4G17500.1 not_1st 0.487964989 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17500.1     MSMTADS-------QSDYAFLESIRRHLLGESEP-ILSESTASSVTQSCVTGQSIKP---
gm011461_Glyma0 --MYGQSSSSSSSYESDLALLDSIRHHLLGESES-IFGAPNFGSG---------------
gm029721_Glyma1 --MYGQ-----SCYESDLALLDSIRRHLLGDSEEHRFGAPNVNSGSTP------------
gm047103_Glyma1 --MYGR----SDSYESDLALLDSIRRHLLGESEL-IFGAPNFGSG---------------
pt009912_POPTR_ --MYGQ----SLLDQPDYAFLDPVRLHLQGETVS---TAPTTTCSYTPAITTTTAAPAAN
                  * .         :.* *:*:.:* ** *::       ..  .                

AT4G17500.1     -----VYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSS--SS
gm011461_Glyma0 --------RSSSFSSLDSCLSDNWGELPFKEDDTEDMVLYGVLRDAVNVGWVPSLDAGSP
gm029721_Glyma1 -----LYSRSSSFGRLYPCLSNDWGELPLMEDDSEDMLLYGVLRDAVNVGWVPSLDASSP
gm047103_Glyma1 --------RSSSFSSLDSCLSDDWGELPFKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSP
pt009912_POPTR_ YTPPLVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYAVLRDAVTVGWVPSLK--TD
                        *..**. * .*:::.**:**:  :*:***.:*.:*.**.  ** ** .  : 

AT4G17500.1     DEDRSSF--P-SVKIETPESFAAVDSVPVKKEKTSP-------VSAAVTAAKGKHYRGVR
gm011461_Glyma0 ESVSSGF--P-AVKLEP-------DLMPALISPCPPPAAAAE--EKKVVPAKGKHYRGVR
gm029721_Glyma1 ESFSSAFMPPVTVKSET-------DLFPAPEPICNPPVVQGP--APAVVPAKGKHYRGVR
gm047103_Glyma1 ESVSSGF--P-AVKLEP-------DVMPALINPCPPPAPAVE--EKKVVPPKGKHYRGVR
pt009912_POPTR_ QLVQPNF--P-LVKLE-----------PTENLAVSPPSTAVPVAEPAVLPSKGKHYRGVR
                :   . *  *  ** *           *.      *           * ..*********

AT4G17500.1     QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGE
gm011461_Glyma0 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE
gm029721_Glyma1 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGE
gm047103_Glyma1 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE
pt009912_POPTR_ QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE
                ****************************************:**************:****

AT4G17500.1     PDPVRIKSKRSS--FSSSNENGA-PKKRRTVAAGG-----------GMDKGLTVKCEVVE
gm011461_Glyma0 PDPVRVKSKRSS----SPESAAALPAKRKKVVVVGT-------------VQEQVGSQVAE
gm029721_Glyma1 PEPVRVTAKRASAEPCSSSESGSWVKKRKKV----------------------VG-----
gm047103_Glyma1 PDPVRVTSKRSS----SPESMAAAAPKRKKVMVVGT-------------VQEQVGSQVVE
pt009912_POPTR_ PDPVRVTSKRSSPEPSSSVDSGS-PKRRKKV--GGTAGAATVVAKAGLEIGNGVGCQVG-
                *:***:.:**:*    *. . .:   :*:.*                      *      

AT4G17500.1     VARGDRLLVL
gm011461_Glyma0 CTRGEQLLVS
gm029721_Glyma1 ----------
gm047103_Glyma1 CTRGEQLLVS
pt009912_POPTR_ -THGEQMLVI
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     M S M T A D S - - - - - - - Q S D Y A F L E S I R R H L L G E S E P - I L S E S T A S S V T Q S C V T G Q S I K P - - -
gm011461_Glyma0    - - M Y G Q S S S S S S S Y E S D L A L L D S I R H H L L G E S E S - I F G A P N F G S G - - - - - - - - - - - - - - -
gm029721_Glyma1    - - M Y G Q - - - - - S C Y E S D L A L L D S I R R H L L G D S E E H R F G A P N V N S G S T P - - - - - - - - - - - -
gm047103_Glyma1    - - M Y G R - - - - S D S Y E S D L A L L D S I R R H L L G E S E L - I F G A P N F G S G - - - - - - - - - - - - - - -
pt009912_POPTR_    - - M Y G Q - - - - S L L D Q P D Y A F L D P V R L H L Q G E T V S - - - T A P T T T C S Y T P A I T T T T A A P A A N
 
AT4G17500.1     - - - - - V Y G R N P S F S K L Y P C F T E S W G D L P L K E N D S E D M L V Y G I L N D A F H G G W E P S S S - - S S
gm011461_Glyma0    - - - - - - - - R S S S F S S L D S C L S D N W G E L P F K E D D T E D M V L Y G V L R D A V N V G W V P S L D A G S P
gm029721_Glyma1    - - - - - L Y S R S S S F G R L Y P C L S N D W G E L P L M E D D S E D M L L Y G V L R D A V N V G W V P S L D A S S P
gm047103_Glyma1    - - - - - - - - R S S S F S S L D S C L S D D W G E L P F K E D D S E D M V L Y G V L R D A V N V G W V P S L D A G S P
pt009912_POPTR_    Y T P P L V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y A V L R D A V T V G W V P S L K - - T D
 
AT4G17500.1     D E D R S S F - - P - S V K I E T P E S F A A V D S V P V K K E K T S P - - - - - - - V S A A V T A A K G K H Y R G V R
gm011461_Glyma0    E S V S S G F - - P - A V K L E P - - - - - - - D L M P A L I S P C P P P A A A A E - - E K K V V P A K G K H Y R G V R
gm029721_Glyma1    E S F S S A F M P P V T V K S E T - - - - - - - D L F P A P E P I C N P P V V Q G P - - A P A V V P A K G K H Y R G V R
gm047103_Glyma1    E S V S S G F - - P - A V K L E P - - - - - - - D V M P A L I N P C P P P A P A V E - - E K K V V P P K G K H Y R G V R
pt009912_POPTR_    Q L V Q P N F - - P - L V K L E - - - - - - - - - - - P T E N L A V S P P S T A V P V A E P A V L P S K G K H Y R G V R
 
AT4G17500.1     Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N F P L R V N S G E
gm011461_Glyma0    Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E
gm029721_Glyma1    Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R I N S G E
gm047103_Glyma1    Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E
pt009912_POPTR_    Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E
 
AT4G17500.1     P D P V R I K S K R S S - - F S S S N E N G A - P K K R R T V A A G G - - - - - - - - - - - G M D K G L T V K C E V V E
gm011461_Glyma0    P D P V R V K S K R S S - - - - S P E S A A A L P A K R K K V V V V G T - - - - - - - - - - - - - V Q E Q V G S Q V A E
gm029721_Glyma1    P E P V R V T A K R A S A E P C S S S E S G S W V K K R K K V - - - - - - - - - - - - - - - - - - - - - - V G - - - - -
gm047103_Glyma1    P D P V R V T S K R S S - - - - S P E S M A A A A P K R K K V M V V G T - - - - - - - - - - - - - V Q E Q V G S Q V V E
pt009912_POPTR_    P D P V R V T S K R S S P E P S S S V D S G S - P K R R K K V - - G G T A G A A T V V A K A G L E I G N G V G C Q V G -
 
AT4G17500.1     V A R G D R L L V L
gm011461_Glyma0    C T R G E Q L L V S
gm029721_Glyma1    - - - - - - - - - -
gm047103_Glyma1    C T R G E Q L L V S
pt009912_POPTR_    - T H G E Q M L V I
 
0