fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002107 not found in 274aa AT4G17500.1 1st_1st 0.477024070 Ia
Pt032748 not found in 283aa AT4G17500.1 1st_1st 0.490153172 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17500.1     MSMTAD-SQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSI------------
gm002107_Glyma0 MYGQSS-YESDLALLDSIRRHLLGDSEE--HKFGAPNVS----SGNT-------------
pt032748_POPTR_ MYGENFLDQSDYAFLESVRMHLLGEPT---SPTTASSCFNPASTNSAMSAAAATTPATCT
                *       :** *:*:*:* ****:.        *..      :..:             

AT4G17500.1     -KPVYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPS-SSSSDED
gm002107_Glyma0 --PAYSRSSCFSRLYPCLSNDWGELPLKEDDSEDMLLYGVLRDAINAGWVPSLDASSPES
pt032748_POPTR_ PVPVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVPSLKT---DQ
                  *.* *...** ****:::.**:**** :*****::**:* **.  ** ** .:   :.

AT4G17500.1     RSS--FPSVKIET-PESFAAVDSV--PVKKEK--TSPVSAAVTAAKGKHYRGVRQRPWGK
gm002107_Glyma0 FSSGFIPAVTVKSEPDLFPAPEPVYIPPAAQK--AEP---AVVPAKGKHYRGVRQRPWGK
pt032748_POPTR_ FIEPNLPAVKLEPSENLTIS------PPRTEAPIAEP---AVVPSKGKHYRGVRQRPWGK
                  .  :*:*.::.  :   :      *   :   :.*   **..:***************

AT4G17500.1     FAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRI
gm002107_Glyma0 FAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRV
pt032748_POPTR_ FAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPVRV
                **********************************:**************:***** ***:

AT4G17500.1     KSKRSS---FSSSNENGAPKKRR-----------TVAAGGGMDKGLTVKCEVVEVARGDR
gm002107_Glyma0 TAKRYSPEPSSSSSDSASSTKRRKKVVG-----STVTAQSGLRKE-QVGSQVAHSAHVES
pt032748_POPTR_ TSKRSSPE-RSSSVESASLKRKK---VGGTAGTATVVPQAGLEMRNGVGCQVG--THGEQ
                .:** *    *** :..: .:::           **.. .*:     * .:*   :: : 

AT4G17500.1     LLVL---
gm002107_Glyma0 SCWSTNA
pt032748_POPTR_ LLVI---
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     M S M T A D - S Q S D Y A F L E S I R R H L L G E S E P I L S E S T A S S V T Q S C V T G Q S I - - - - - - - - - - - -
gm002107_Glyma0    M Y G Q S S - Y E S D L A L L D S I R R H L L G D S E E - - H K F G A P N V S - - - - S G N T - - - - - - - - - - - - -
pt032748_POPTR_    M Y G E N F L D Q S D Y A F L E S V R M H L L G E P T - - - S P T T A S S C F N P A S T N S A M S A A A A T T P A T C T
 
AT4G17500.1     - K P V Y G R N P S F S K L Y P C F T E S W G D L P L K E N D S E D M L V Y G I L N D A F H G G W E P S - S S S S D E D
gm002107_Glyma0    - - P A Y S R S S C F S R L Y P C L S N D W G E L P L K E D D S E D M L L Y G V L R D A I N A G W V P S L D A S S P E S
pt032748_POPTR_    P V P V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P S L K T - - - D Q
 
AT4G17500.1     R S S - - F P S V K I E T - P E S F A A V D S V - - P V K K E K - - T S P V S A A V T A A K G K H Y R G V R Q R P W G K
gm002107_Glyma0    F S S G F I P A V T V K S E P D L F P A P E P V Y I P P A A Q K - - A E P - - - A V V P A K G K H Y R G V R Q R P W G K
pt032748_POPTR_    F I E P N L P A V K L E P S E N L T I S - - - - - - P P R T E A P I A E P - - - A V V P S K G K H Y R G V R Q R P W G K
 
AT4G17500.1     F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N F P L R V N S G E P D P V R I
gm002107_Glyma0    F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R I N S G E P E P V R V
pt032748_POPTR_    F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V R V
 
AT4G17500.1     K S K R S S - - - F S S S N E N G A P K K R R - - - - - - - - - - - T V A A G G G M D K G L T V K C E V V E V A R G D R
gm002107_Glyma0    T A K R Y S P E P S S S S S D S A S S T K R R K K V V G - - - - - S T V T A Q S G L R K E - Q V G S Q V A H S A H V E S
pt032748_POPTR_    T S K R S S P E - R S S S V E S A S L K R K K - - - V G G T A G T A T V V P Q A G L E M R N G V G C Q V G - - T H G E Q
 
AT4G17500.1     L L V L - - -
gm002107_Glyma0    S C W S T N A
pt032748_POPTR_    L L V I - - -
 
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