fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009066 not found in 303aa AT4G17500.1 1st_1st 0.339168490 Ib
Sb027963 not found in 451aa AT4G17500.1 1st_1st 0.310722100 Ib
Sm018161 not found in 131aa AT4G17500.1 1st_1st 0.262582056 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17500.1     -------MSMTADSQS-DYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYG
Sm018161_Selmo1 ------------------------------------------------------------
Sb027963_Sorbi1 RQRSTNTKMLLLNPAC-EAAALDTIRHHLLDEPA-------ASSVSMSAAPP---RPVYC
Os009066_Os02t0 ---------MLLNPASREVAALDSIRHHLLEEEE-------ETPATAPAPTR---RPVYC
                                                                            

AT4G17500.1     RNPSFSKLYPCFTESWGD-LPLKENDSEDMLVYGILNDAFHGGWEP-----------SSS
Sm018161_Selmo1 -----------------------ENDSEDMILYGLLKEAARTGWQP-----------LTP
Sb027963_Sorbi1 RSTSFGSL---VADQWSESLPFRPDDADDMVVFGALRDAFSRGWLPDGSFAAVKPEPLAS
Os009066_Os02t0 RSSSFGSL---VADQWSESLPFRPNDAEDMVVYGALRDAFSSGWLPDGSFAAVKPE----
                                        :*::**:::* *.:*   ** *              

AT4G17500.1     SSDEDRSSFP-------------------SVKIETPESF----AAVDSVPVKKEKTSPVS
Sm018161_Selmo1 KQRKEPEIAD-------------------AVKPEIPAHC----A----IPLLTQSETRGT
Sb027963_Sorbi1 SPDDDSSPYDHGSYSYLGGGAVGGLL-RAAEEPETPTEA----AAM--TPGTASEE---E
Os009066_Os02t0 --SQDS--YD--------GSSIGSFLASSSSEAGTPGEVTSTEATV--TPGIREGE---G
                   .:                        : :   *       *     *   .      

AT4G17500.1     AAVTAA--KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRM
Sm018161_Selmo1 AAMPAASFKRQHYRGVRQRPWGKFAAEIRDSMRQGARIWLGTFDTAEQAARAYDRAAFKM
Sb027963_Sorbi1 AAVAVAG-RGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYDSAEDAAVAYDRAAYRM
Os009066_Os02t0 EAVAVAS-RGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRM
                 *:..*  : :*******************. ::***:****:::**:** ******::*

AT4G17500.1     RGSRALLNFPLRVNS-------------------GEPDPVRI----KSKRSSFSSSNENG
Sm018161_Selmo1 RGARALLNFPLQ------------------------------------------------
Sb027963_Sorbi1 RGSRALLNFPLRISSEIAAAITAAAPAPAVGDKRASPEPTAS-----SDSSSPSSSSSSG
Os009066_Os02t0 RGSRALLNFPLRIGSEIAAAAAAA----AAGNKRPYPDPASSGSSSPSSSSSSSSSSSSG
                **:********:                                                

AT4G17500.1     APKKR-RTVAAGGGMDKGLTVKCEVVEVARGDRLLVL----------------
Sm018161_Selmo1 -----------------------------------------------------
Sb027963_Sorbi1 TPKRRKRGEAAAATMAMALV----PPPPAQAPVQLTLPAHPWFAAGPVQQLVS
Os009066_Os02t0 SPKRRKRGEAAAASMAMALVP--PPPPPAQAPVQLALPAQPWFAAGPIQQLVS
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     - - - - - - - M S M T A D S Q S - D Y A F L E S I R R H L L G E S E P I L S E S T A S S V T Q S C V T G Q S I K P V Y G
Sm018161_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027963_Sorbi1    R Q R S T N T K M L L L N P A C - E A A A L D T I R H H L L D E P A - - - - - - - A S S V S M S A A P P - - - R P V Y C
Os009066_Os02t0    - - - - - - - - - M L L N P A S R E V A A L D S I R H H L L E E E E - - - - - - - E T P A T A P A P T R - - - R P V Y C
 
AT4G17500.1     R N P S F S K L Y P C F T E S W G D - L P L K E N D S E D M L V Y G I L N D A F H G G W E P - - - - - - - - - - - S S S
Sm018161_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - E N D S E D M I L Y G L L K E A A R T G W Q P - - - - - - - - - - - L T P
Sb027963_Sorbi1    R S T S F G S L - - - V A D Q W S E S L P F R P D D A D D M V V F G A L R D A F S R G W L P D G S F A A V K P E P L A S
Os009066_Os02t0    R S S S F G S L - - - V A D Q W S E S L P F R P N D A E D M V V Y G A L R D A F S S G W L P D G S F A A V K P E - - - -
 
AT4G17500.1     S S D E D R S S F P - - - - - - - - - - - - - - - - - - - S V K I E T P E S F - - - - A A V D S V P V K K E K T S P V S
Sm018161_Selmo1    K Q R K E P E I A D - - - - - - - - - - - - - - - - - - - A V K P E I P A H C - - - - A - - - - I P L L T Q S E T R G T
Sb027963_Sorbi1    S P D D D S S P Y D H G S Y S Y L G G G A V G G L L - R A A E E P E T P T E A - - - - A A M - - T P G T A S E E - - - E
Os009066_Os02t0    - - S Q D S - - Y D - - - - - - - - G S S I G S F L A S S S S E A G T P G E V T S T E A T V - - T P G I R E G E - - - G
 
AT4G17500.1     A A V T A A - - K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M
Sm018161_Selmo1    A A M P A A S F K R Q H Y R G V R Q R P W G K F A A E I R D S M R Q G A R I W L G T F D T A E Q A A R A Y D R A A F K M
Sb027963_Sorbi1    A A V A V A G - R G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T Y D S A E D A A V A Y D R A A Y R M
Os009066_Os02t0    E A V A V A S - R G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T F D S A E E A A V A Y D R A A Y R M
 
AT4G17500.1     R G S R A L L N F P L R V N S - - - - - - - - - - - - - - - - - - - G E P D P V R I - - - - K S K R S S F S S S N E N G
Sm018161_Selmo1    R G A R A L L N F P L Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027963_Sorbi1    R G S R A L L N F P L R I S S E I A A A I T A A A P A P A V G D K R A S P E P T A S - - - - - S D S S S P S S S S S S G
Os009066_Os02t0    R G S R A L L N F P L R I G S E I A A A A A A A - - - - A A G N K R P Y P D P A S S G S S S P S S S S S S S S S S S S G
 
AT4G17500.1     A P K K R - R T V A A G G G M D K G L T V K C E V V E V A R G D R L L V L - - - - - - - - - - - - - - - -
Sm018161_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027963_Sorbi1    T P K R R K R G E A A A A T M A M A L V - - - - P P P P A Q A P V Q L T L P A H P W F A A G P V Q Q L V S
Os009066_Os02t0    S P K R R K R G E A A A A S M A M A L V P - - P P P P P A Q A P V Q L A L P A Q P W F A A G P I Q Q L V S
 
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