fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032748 not found in 283aa AT4G17500.1 1st_1st 0.490153172 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17500.1     MSMTADS---QSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIK---------
pt032748_POPTR_ --MYGENFLDQSDYAFLESVRMHLLGEPT---SPTTASSCFNPASTNSAMSAAAATTPAT
                  * .:.   *********:* *****.    * :****  :.. *..::.         

AT4G17500.1     ----PVYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDE
pt032748_POPTR_ CTPVPVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVPSLKTDQF
                    *** *..***.****:**.******* :*****::**:*.**.  ** ** .:.: 

AT4G17500.1     DRSSFPSVKIETPESFAAVDSVPVKKEKTSPVS-AAVTAAKGKHYRGVRQRPWGKFAAEI
pt032748_POPTR_ IEPNLPAVKLEPSENLTI---SPPRTE--APIAEPAVVPSKGKHYRGVRQRPWGKFAAEI
                 ...:*:**:*..*.::     * :.*  :*:: .**..:********************

AT4G17500.1     RDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRS
pt032748_POPTR_ RDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPVRVTSKRS
                *****************************:******************** ***:.****

AT4G17500.1     S--FSSSNENGAPKKRR--------TVAAGGGMDKGLTVKCEVVEVARGDRLLVL
pt032748_POPTR_ SPERSSSVESASLKRKKVGGTAGTATVVPQAGLEMRNGVGCQV--GTHGEQLLVI
                *   *** *..: *:::        **.. .*::    * *:*   ::*::***:
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     M S M T A D S - - - Q S D Y A F L E S I R R H L L G E S E P I L S E S T A S S V T Q S C V T G Q S I K - - - - - - - - -
pt032748_POPTR_    - - M Y G E N F L D Q S D Y A F L E S V R M H L L G E P T - - - S P T T A S S C F N P A S T N S A M S A A A A T T P A T
 
AT4G17500.1     - - - - P V Y G R N P S F S K L Y P C F T E S W G D L P L K E N D S E D M L V Y G I L N D A F H G G W E P S S S S S D E
pt032748_POPTR_    C T P V P V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P S L K T D Q F
 
AT4G17500.1     D R S S F P S V K I E T P E S F A A V D S V P V K K E K T S P V S - A A V T A A K G K H Y R G V R Q R P W G K F A A E I
pt032748_POPTR_    I E P N L P A V K L E P S E N L T I - - - S P P R T E - - A P I A E P A V V P S K G K H Y R G V R Q R P W G K F A A E I
 
AT4G17500.1     R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N F P L R V N S G E P D P V R I K S K R S
pt032748_POPTR_    R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V R V T S K R S
 
AT4G17500.1     S - - F S S S N E N G A P K K R R - - - - - - - - T V A A G G G M D K G L T V K C E V V E V A R G D R L L V L
pt032748_POPTR_    S P E R S S S V E S A S L K R K K V G G T A G T A T V V P Q A G L E M R N G V G C Q V - - G T H G E Q L L V I
 
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