fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032748 not found in 283aa AT4G17500.1 1st_1st 0.490153172 Ia
Pt009912 not found in 280aa AT4G17500.1 not_1st 0.487964989 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17500.1     MSMTADS---QSDYAFLESIRRHLLGE---SEPILSES--TASSVTQSCVTGQSIKP---
pt032748_POPTR_ --MYGENFLDQSDYAFLESVRMHLLGE--PTSPTTASSCFNPASTNSAMSAAAATTPATC
pt009912_POPTR_ --MYGQSLLDQPDYAFLDPVRLHLQGETVSTAPTTTCS-YTPAITTTTAAPAANYTP---
                  * .:.   *.*****:.:* ** **   : *  : *  ..: .. :  ..   .*   

AT4G17500.1     ----VYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDED
pt032748_POPTR_ TPVPVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVPSLKTDQFI
pt009912_POPTR_ -PL-VYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYAVLRDAVTVGWVPSLKTDQLV
                    ** *..***.****:**.******* :*****::*.:* **.  ** ** .:.:  

AT4G17500.1     RSSFPSVKIETPESFAAVDSVPVKKEKTSPVS-AAVTAAKGKHYRGVRQRPWGKFAAEIR
pt032748_POPTR_ EPNLPAVKLEPSENLTI--SPP---RTEAPIAEPAVVPSKGKHYRGVRQRPWGKFAAEIR
pt009912_POPTR_ QPNFPLVKLEPTENLAV--SPP---STAVPVAEPAVLPSKGKHYRGVRQRPWGKFAAEIR
                ...:* **:*..*.::   * *    .  *:: .** .:*********************

AT4G17500.1     DPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSS
pt032748_POPTR_ DPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPVRVTSKRSS
pt009912_POPTR_ DPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSS
                ****************************:******************** ***:.*****

AT4G17500.1     --FSSSNENGAPKKRR---------TVAAGGGMDKGLTVKCEVVEVARGDRLLVL
pt032748_POPTR_ PERSSSVESASLK-RKKVGGTAGTATVVPQAGLEMRNGVGCQV--GTHGEQLLVI
pt009912_POPTR_ PEPSSSVDSGSPKRRKKVGGTAGAATVVAKAGLEIGNGVGCQV--GTHGEQMLVI
                   *** :..: * *:         **.. .*::    * *:*   ::*:::**:
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     M S M T A D S - - - Q S D Y A F L E S I R R H L L G E - - - S E P I L S E S - - T A S S V T Q S C V T G Q S I K P - - -
pt032748_POPTR_    - - M Y G E N F L D Q S D Y A F L E S V R M H L L G E - - P T S P T T A S S C F N P A S T N S A M S A A A A T T P A T C
pt009912_POPTR_    - - M Y G Q S L L D Q P D Y A F L D P V R L H L Q G E T V S T A P T T T C S - Y T P A I T T T T A A P A A N Y T P - - -
 
AT4G17500.1     - - - - V Y G R N P S F S K L Y P C F T E S W G D L P L K E N D S E D M L V Y G I L N D A F H G G W E P S S S S S D E D
pt032748_POPTR_    T P V P V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P S L K T D Q F I
pt009912_POPTR_    - P L - V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y A V L R D A V T V G W V P S L K T D Q L V
 
AT4G17500.1     R S S F P S V K I E T P E S F A A V D S V P V K K E K T S P V S - A A V T A A K G K H Y R G V R Q R P W G K F A A E I R
pt032748_POPTR_    E P N L P A V K L E P S E N L T I - - S P P - - - R T E A P I A E P A V V P S K G K H Y R G V R Q R P W G K F A A E I R
pt009912_POPTR_    Q P N F P L V K L E P T E N L A V - - S P P - - - S T A V P V A E P A V L P S K G K H Y R G V R Q R P W G K F A A E I R
 
AT4G17500.1     D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N F P L R V N S G E P D P V R I K S K R S S
pt032748_POPTR_    D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V R V T S K R S S
pt009912_POPTR_    D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P D P V R V T S K R S S
 
AT4G17500.1     - - F S S S N E N G A P K K R R - - - - - - - - - T V A A G G G M D K G L T V K C E V V E V A R G D R L L V L
pt032748_POPTR_    P E R S S S V E S A S L K - R K K V G G T A G T A T V V P Q A G L E M R N G V G C Q V - - G T H G E Q L L V I
pt009912_POPTR_    P E P S S S V D S G S P K R R K K V G G T A G A A T V V A K A G L E I G N G V G C Q V - - G T H G E Q M L V I
 
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