fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027963 not found in 451aa AT4G17500.1 1st_1st 0.310722100 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17500.1     -------MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGR
Sb027963_Sorbi1 RQRSTNTKMLLLNPACEAAALDTIRHHL-------LDEPAASSVSMSAAPP---RPVYCR
                         :  :. .: * *::**:**       *.*.:****: *...    :*** *

AT4G17500.1     NPSFSKLYPCFTESWGD-LPLKENDSEDMLVYGILNDAFHGGW-----------EPSSSS
Sb027963_Sorbi1 STSFGSL---VADQWSESLPFRPDDADDMVVFGALRDAFSRGWLPDGSFAAVKPEPLASS
                ..**..*   .::.*.: **:: :*::**:*:* *.***  **           ** :**

AT4G17500.1     SDEDRSSF------------------PSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAA
Sb027963_Sorbi1 PDDDSSPYDHGSYSYLGGGAVGGLLRAAEEPETPTEAAAMTPGTASEEE----AAVAVAG
                .*:* *.:                  .: : *** . **: . ...:*:    :*...*.

AT4G17500.1     KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLN
Sb027963_Sorbi1 RGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLN
                :*********************************:::*****:******:**********

AT4G17500.1     FPLRVNS-------------------GEPDPVRIKSKRSSFSSSNENGAPKKR-RTVAAG
Sb027963_Sorbi1 FPLRISSEIAAAITAAAPAPAVGDKRASPEPT-ASSDSSSPSSSSSSGTPKRRKRGEAAA
                ****:.*                   ..*:*.  .*. ** ***...*:**:* *  **.

AT4G17500.1     GGMDKGLTVKCEVVEVARGDRLLVL----------------
Sb027963_Sorbi1 ATMAMALVPP----PPAQAPVQLTLPAHPWFAAGPVQQLVS
                . *  .*.        *:.   *.*
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     - - - - - - - M S M T A D S Q S D Y A F L E S I R R H L L G E S E P I L S E S T A S S V T Q S C V T G Q S I K P V Y G R
Sb027963_Sorbi1    R Q R S T N T K M L L L N P A C E A A A L D T I R H H L - - - - - - - L D E P A A S S V S M S A A P P - - - R P V Y C R
 
AT4G17500.1     N P S F S K L Y P C F T E S W G D - L P L K E N D S E D M L V Y G I L N D A F H G G W - - - - - - - - - - - E P S S S S
Sb027963_Sorbi1    S T S F G S L - - - V A D Q W S E S L P F R P D D A D D M V V F G A L R D A F S R G W L P D G S F A A V K P E P L A S S
 
AT4G17500.1     S D E D R S S F - - - - - - - - - - - - - - - - - - P S V K I E T P E S F A A V D S V P V K K E K T S P V S A A V T A A
Sb027963_Sorbi1    P D D D S S P Y D H G S Y S Y L G G G A V G G L L R A A E E P E T P T E A A A M T P G T A S E E E - - - - A A V A V A G
 
AT4G17500.1     K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N
Sb027963_Sorbi1    R G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T Y D S A E D A A V A Y D R A A Y R M R G S R A L L N
 
AT4G17500.1     F P L R V N S - - - - - - - - - - - - - - - - - - - G E P D P V R I K S K R S S F S S S N E N G A P K K R - R T V A A G
Sb027963_Sorbi1    F P L R I S S E I A A A I T A A A P A P A V G D K R A S P E P T - A S S D S S S P S S S S S S G T P K R R K R G E A A A
 
AT4G17500.1     G G M D K G L T V K C E V V E V A R G D R L L V L - - - - - - - - - - - - - - - -
Sb027963_Sorbi1    A T M A M A L V P P - - - - P P A Q A P V Q L T L P A H P W F A A G P V Q Q L V S
 
0