fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002107 not found in 274aa AT4G17500.1 1st_1st 0.477024070 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17500.1     MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKL
gm002107_Glyma0 MYGQSSYESDLALLDSIRRHLLGDSEE--HKFGAPNVS----SGNT--PAYSRSSCFSRL
                *   :. :** *:*:********:**    :  *..*:    :*::  *.*.*...**:*

AT4G17500.1     YPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPS-SSSSDEDRSS--FPSVKIET-
gm002107_Glyma0 YPCLSNDWGELPLKEDDSEDMLLYGVLRDAINAGWVPSLDASSPESFSSGFIPAVTVKSE
                ***:::.**:*****:******:**:*.**::.** ** .:** *. **  :*:*.::: 

AT4G17500.1     PESFAAVDSV--PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVW
gm002107_Glyma0 PDLFPAPEPVYIPPAAQKAEP---AVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVW
                *: *.* :.*  *   :*:.*   **..********************************

AT4G17500.1     LGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSS---FSSSNEN
gm002107_Glyma0 LGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRYSPEPSSSSSDS
                ******************:**************:*****:***:.:** *    ***.:.

AT4G17500.1     GAPKKRR------TVAAGGGMDKGLTVKCEVVEVARGDRLLVL---
gm002107_Glyma0 ASSTKRRKKVVGSTVTAQSGLRKE-QVGSQVAHSAHVESSCWSTNA
                .:..***      **:* .*: *   * .:*.. *: :
BoxShade v3.31 C (beta, 970507) Output
AT4G17500.1     M S M T A D S Q S D Y A F L E S I R R H L L G E S E P I L S E S T A S S V T Q S C V T G Q S I K P V Y G R N P S F S K L
gm002107_Glyma0    M Y G Q S S Y E S D L A L L D S I R R H L L G D S E E - - H K F G A P N V S - - - - S G N T - - P A Y S R S S C F S R L
 
AT4G17500.1     Y P C F T E S W G D L P L K E N D S E D M L V Y G I L N D A F H G G W E P S - S S S S D E D R S S - - F P S V K I E T -
gm002107_Glyma0    Y P C L S N D W G E L P L K E D D S E D M L L Y G V L R D A I N A G W V P S L D A S S P E S F S S G F I P A V T V K S E
 
AT4G17500.1     P E S F A A V D S V - - P V K K E K T S P V S A A V T A A K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W
gm002107_Glyma0    P D L F P A P E P V Y I P P A A Q K A E P - - - A V V P A K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W
 
AT4G17500.1     L G T F E T A E D A A L A Y D R A A F R M R G S R A L L N F P L R V N S G E P D P V R I K S K R S S - - - F S S S N E N
gm002107_Glyma0    L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R I N S G E P E P V R V T A K R Y S P E P S S S S S D S
 
AT4G17500.1     G A P K K R R - - - - - - T V A A G G G M D K G L T V K C E V V E V A R G D R L L V L - - -
gm002107_Glyma0    A S S T K R R K K V V G S T V T A Q S G L R K E - Q V G S Q V A H S A H V E S S C W S T N A
 
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