fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm007954 not found in 176aa AT4G17750.1 1st_1st 0.259515570 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17750.1     MFVNFKYFSFFIRTKMDGVTGGGTNIGEAVTAPPPRNPHPATLLNANSLPPPFLSKTYDM
Sm007954_Selmo1 ----------------------------------PAQP----MDSSNSAPPPFLNKTYDM
                                                  * :*    : .:** *****.*****

AT4G17750.1     VEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR
Sm007954_Selmo1 VEDPSTDPIVSWNPSGNGFIVWNLNEFQQQLLPKFFKHNNFSSFVRQLNTYGFRKVDPDR
                ****:**.****.*:.*.****:  **.::****:*************************

AT4G17750.1     WEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFG
Sm007954_Selmo1 WEFGNEGFLKGKKQLLKGIHRKK------SASHQPPAVQQPQPQPQPSSKPACVEVGKFG
                ***.*****:*:*:*** * *:*      *:* :* : * .* * . :: .:********

AT4G17750.1     LEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQN
Sm007954_Selmo1 LEGEIERLKRDKNVLMSELVRLRQQQQQTDSDLQMILQRL--------------------
                ** *:*:*********.***:****** **..**:::::*                    

AT4G17750.1     PTFLSQFIQKQTDSNMHVTEANKKRRLREDSTAATESNSHSHSLEASDGQIVKYQPLRND
Sm007954_Selmo1 ------------------------------------------------------------
                                                                            

AT4G17750.1     SMMWNMMKTDDKYPFLDGFSSPNQVSGVTLQEVLPITSGQSQAYASVPSGQPLSYLPSTS
Sm007954_Selmo1 ------------------------------------------------------------
                                                                            

AT4G17750.1     TSLPDTIMPETSQIPQLTRESINDFPTENFMDTEKNVPEAFISPSPFLDGGSVPIQLEGI
Sm007954_Selmo1 ------------------------------------------------------------
                                                                            

AT4G17750.1     PEDPEIDELMSNFEFLEEYMPESPVFGDATTLENNNNNNNNNNNNNNNNNNNNTNGRHMD
Sm007954_Selmo1 ------------------------------------------------------------
                                                                            

AT4G17750.1     KLIEELGLLTSETEH
Sm007954_Selmo1 ---------------
BoxShade v3.31 C (beta, 970507) Output
AT4G17750.1     M F V N F K Y F S F F I R T K M D G V T G G G T N I G E A V T A P P P R N P H P A T L L N A N S L P P P F L S K T Y D M
Sm007954_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P A Q P - - - - M D S S N S A P P P F L N K T Y D M
 
AT4G17750.1     V E D P A T D A I V S W S P T N N S F I V W D P P E F S R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V D P D R
Sm007954_Selmo1    V E D P S T D P I V S W N P S G N G F I V W N L N E F Q Q Q L L P K F F K H N N F S S F V R Q L N T Y G F R K V D P D R
 
AT4G17750.1     W E F A N E G F L R G Q K H L L K K I S R R K S V Q G H G S S S S N P Q S Q Q L S Q G Q G S M A A L S S C V E V G K F G
Sm007954_Selmo1    W E F G N E G F L K G K K Q L L K G I H R K K - - - - - - S A S H Q P P A V Q Q P Q P Q P Q P S S K P A C V E V G K F G
 
AT4G17750.1     L E E E V E Q L K R D K N V L M Q E L V K L R Q Q Q Q T T D N K L Q V L V K H L Q V M E Q R Q Q Q I M S F L A K A V Q N
Sm007954_Selmo1    L E G E I E R L K R D K N V L M S E L V R L R Q Q Q Q Q T D S D L Q M I L Q R L - - - - - - - - - - - - - - - - - - - -
 
AT4G17750.1     P T F L S Q F I Q K Q T D S N M H V T E A N K K R R L R E D S T A A T E S N S H S H S L E A S D G Q I V K Y Q P L R N D
Sm007954_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G17750.1     S M M W N M M K T D D K Y P F L D G F S S P N Q V S G V T L Q E V L P I T S G Q S Q A Y A S V P S G Q P L S Y L P S T S
Sm007954_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G17750.1     T S L P D T I M P E T S Q I P Q L T R E S I N D F P T E N F M D T E K N V P E A F I S P S P F L D G G S V P I Q L E G I
Sm007954_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G17750.1     P E D P E I D E L M S N F E F L E E Y M P E S P V F G D A T T L E N N N N N N N N N N N N N N N N N N N N T N G R H M D
Sm007954_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G17750.1     K L I E E L G L L T S E T E H
Sm007954_Selmo1    - - - - - - - - - - - - - - -
 
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