fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018659 not found in 305aa AT4G17800.1 1st_1st 0.555819477 Ia
Sb029863 not found in 559aa AT4G17800.1 1st_1st 0.532066508 Ia
Gm050287 not found in 268aa AT4G17800.1 1st_1st 0.629453681 Ia
Pt032727 not found in 298aa AT4G17800.1 1st_1st 0.722090261 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17800.1     ---MAGLDLGTA-FRYVNHQL-H-RPDLHLHH------NSSSDD---VTPGAGM-----G
Sb029863_Sorbi1 QKSMAGLDLGTAATRYV-HQLHHLHPDLQLQHSYAKQPEPSEDD-PHGSGGGGGNSNNGG
pt032727_POPTR_ ---MAGLDLGTT-SRYV-HQLHH-RPDLHLQH------QPDPEDHDSNRAGGGLGGGSGG
Os018659_Os04t0 ---MAGLDLGTAATRYV-HQLHHLHPDLQLQHSYAKQHEPSDDD-PNGSGGGG--NSNGG
gm050287_Glyma1 ---MAGIDLGSA-SHFVHHRL-E-RPDLEDDE------NQQDQD----------------
                   ***:***::  ::* *:* . :***. ..      : . :*                

AT4G17800.1     HFTVDDEDNNNNHQGLDLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVI
Sb029863_Sorbi1 PY--------GEHDGGSSSSGPGAGDA--PGGSGGNGEMVARRPRGRPPGSKNKPKPPVI
pt032727_POPTR_ HFSTDHHHDDGSHQGLDLVAAAAN---------SGQGDLVGRRPRGRPAGSKNKPKPPVI
Os018659_Os04t0 PY--------GDHDGGSSSSGPATD-----GAVGGPGDVVARRPRGRPPGSKNKPKPPVI
gm050287_Glyma1 -------NNLNNHEGLDLVTPN-----------SGPGDVVGRRPRGRPPGSKNKPKPPVI
                          ..*:* .  :             .* *::*.*******.***********

AT4G17800.1     ITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSA-AGA
Sb029863_Sorbi1 ITRESANTLRAHILEVGSGCDVFESVSTYARRRQRGVCVLSGSGVVTNVTLRQPSAPTGA
pt032727_POPTR_ ITRESANTLRAHILEVGNGCDVFECVANYARRRQRGICILSGAGTVTNVSIRQPAA-AGA
Os018659_Os04t0 ITRESANTLRAHILEVGSGCDVFECVSTYARRRQRGVCVLSGSGVVTNVTLRQPSAPAGA
gm050287_Glyma1 ITRESANTLRAHILEVSSGCDVFESVATYARKRQRGICVLSGSGTVTNVTLRQPAA-AGA
                **************** .*****:.*:.***:****:*:***:*.****::***:* :**

AT4G17800.1     VVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAA
Sb029863_Sorbi1 VVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALYAAGPVIVIAA
pt032727_POPTR_ IVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAA
Os018659_Os04t0 VVSLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALYAAGPVIVIAA
gm050287_Glyma1 VVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIAS
                :*:*:* ***********************:**.*********.*** * *:*******:

AT4G17800.1     SFTNVAYERLPLEEDE--------QQQQLGGGSNGGGNLFPEVAAGGG------------
Sb029863_Sorbi1 SFANVAYERLPLEEEEAQAAPPGLQMQPPGGGVDGAGG-----GMGGG----PFPP-DPS
pt032727_POPTR_ SFTNVAYERLPLDEDD--------QLQMQSGGGGGGG------AGGGGVGNSPFNESGTP
Os018659_Os04t0 SFANVAYERLPLEEEEAPPPQAGLQMQQPGGGAD--AG-----GMGGA-----FPP-DPS
gm050287_Glyma1 SFTNVAYERLPLDEEE--------SMQMQQGQSSAGGG-----GSGGGVSNNSFPD---P
                **:*********:*::        . *   *  .  .      . **.            

AT4G17800.1     -GGLPFFNLPMNMQ---PNVQLPV----EGWPGNSGGRGPF
Sb029863_Sorbi1 AAGLPFFNLPLNNM-AGGGSQLPPGADGHGWA---GARPPF
pt032727_POPTR_ SGGLPFFNLPLNMT---ANVQLPV----DGWGGNSGGRVPF
Os018659_Os04t0 AAGLPFFNLPLNNMPGGGGSQLPPGADGHGWA---GARPPF
gm050287_Glyma1 SSGLPFFNLPLNMP------QLPV----DGWAGNSGGRQSY
                 .********:*        ***     .**    *.* .:
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     - - - M A G L D L G T A - F R Y V N H Q L - H - R P D L H L H H - - - - - - N S S S D D - - - V T P G A G M - - - - - G
Sb029863_Sorbi1    Q K S M A G L D L G T A A T R Y V - H Q L H H L H P D L Q L Q H S Y A K Q P E P S E D D - P H G S G G G G G N S N N G G
pt032727_POPTR_    - - - M A G L D L G T T - S R Y V - H Q L H H - R P D L H L Q H - - - - - - Q P D P E D H D S N R A G G G L G G G S G G
Os018659_Os04t0    - - - M A G L D L G T A A T R Y V - H Q L H H L H P D L Q L Q H S Y A K Q H E P S D D D - P N G S G G G G - - N S N G G
gm050287_Glyma1    - - - M A G I D L G S A - S H F V H H R L - E - R P D L E D D E - - - - - - N Q Q D Q D - - - - - - - - - - - - - - - -
 
AT4G17800.1     H F T V D D E D N N N N H Q G L D L A S G G G S G S S G G G G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I
Sb029863_Sorbi1    P Y - - - - - - - - G E H D G G S S S S G P G A G D A - - P G G S G G N G E M V A R R P R G R P P G S K N K P K P P V I
pt032727_POPTR_    H F S T D H H H D D G S H Q G L D L V A A A A N - - - - - - - - - S G Q G D L V G R R P R G R P A G S K N K P K P P V I
Os018659_Os04t0    P Y - - - - - - - - G D H D G G S S S S G P A T D - - - - - G A V G G P G D V V A R R P R G R P P G S K N K P K P P V I
gm050287_Glyma1    - - - - - - - N N L N N H E G L D L V T P N - - - - - - - - - - - S G P G D V V G R R P R G R P P G S K N K P K P P V I
 
AT4G17800.1     I T R E S A N T L R A H I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A - A G A
Sb029863_Sorbi1    I T R E S A N T L R A H I L E V G S G C D V F E S V S T Y A R R R Q R G V C V L S G S G V V T N V T L R Q P S A P T G A
pt032727_POPTR_    I T R E S A N T L R A H I L E V G N G C D V F E C V A N Y A R R R Q R G I C I L S G A G T V T N V S I R Q P A A - A G A
Os018659_Os04t0    I T R E S A N T L R A H I L E V G S G C D V F E C V S T Y A R R R Q R G V C V L S G S G V V T N V T L R Q P S A P A G A
gm050287_Glyma1    I T R E S A N T L R A H I L E V S S G C D V F E S V A T Y A R K R Q R G I C V L S G S G T V T N V T L R Q P A A - A G A
 
AT4G17800.1     V V T L Q G T F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A
Sb029863_Sorbi1    V V T L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G N V V G A L Y A A G P V I V I A A
pt032727_POPTR_    I V T L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A
Os018659_Os04t0    V V S L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G N V V G A L Y A A G P V I V I A A
gm050287_Glyma1    V V T L H G R F E I L S L S G S F L P P P A P P G A T S L T V F L G G G Q G Q V V G G N V V G P L V A S G P V I V I A S
 
AT4G17800.1     S F T N V A Y E R L P L E E D E - - - - - - - - Q Q Q Q L G G G S N G G G N L F P E V A A G G G - - - - - - - - - - - -
Sb029863_Sorbi1    S F A N V A Y E R L P L E E E E A Q A A P P G L Q M Q P P G G G V D G A G G - - - - - G M G G G - - - - P F P P - D P S
pt032727_POPTR_    S F T N V A Y E R L P L D E D D - - - - - - - - Q L Q M Q S G G G G G G G - - - - - - A G G G G V G N S P F N E S G T P
Os018659_Os04t0    S F A N V A Y E R L P L E E E E A P P P Q A G L Q M Q Q P G G G A D - - A G - - - - - G M G G A - - - - - F P P - D P S
gm050287_Glyma1    S F T N V A Y E R L P L D E E E - - - - - - - - S M Q M Q Q G Q S S A G G G - - - - - G S G G G V S N N S F P D - - - P
 
AT4G17800.1     - G G L P F F N L P M N M Q - - - P N V Q L P V - - - - E G W P G N S G G R G P F
Sb029863_Sorbi1    A A G L P F F N L P L N N M - A G G G S Q L P P G A D G H G W A - - - G A R P P F
pt032727_POPTR_    S G G L P F F N L P L N M T - - - A N V Q L P V - - - - D G W G G N S G G R V P F
Os018659_Os04t0    A A G L P F F N L P L N N M P G G G G S Q L P P G A D G H G W A - - - G A R P P F
gm050287_Glyma1    S S G L P F F N L P L N M P - - - - - - Q L P V - - - - D G W A G N S G G R Q S Y
 
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