fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp033407 not found in 311aa AT4G17800.1 1st_1st 0.394299287 Ib
Sm020025 not found in 217aa AT4G17800.1 1st_1st 0.377672209 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17800.1     MAGLDLGTAFRYVNHQLHRPDLHLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGLDLAS
pp033407_Pp1s48 MTQID--APWGIVRARYEKPWEDKHKQAAPEN------FGHVCM---------------A
Sm020025_Selmo1 ------------------------------------------------------------
                                                                            

AT4G17800.1     G--GGS--GS--SGGGGGHG-------------------------GGGDVVGRRPRGRPP
pp033407_Pp1s48 GVEGGTEAGSRPSPQGGNSSDEDQSGSSVPGRPRKRSKGKSRPPPGPGEPS-RKPRGRPP
Sm020025_Selmo1 ---GGM---------------------------------------GAGEIV-RKPRGRPP
                   **                                        * *:   *:******

AT4G17800.1     GSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNV
pp033407_Pp1s48 GSKNKPKPPVIITRENGNAMRPHVLEVASGHDVWESVTDFARRRQRGVCVMGGSGTVTNV
Sm020025_Selmo1 GSKNKPKPPIIITRDSGNAMRPHVLEIAGGCDVGETLAAFARRRQRGLCVLGGSGTVANV
                *********:****:..*::*.*:**::.* ** : :: :*******:**:.*****:**

AT4G17800.1     SIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQ-GQVVGGSVVGEL
pp033407_Pp1s48 TLRQPTTPGATVTIHGRFEIISLSGSYLPPPAPSPPTGLTISFAGAS-GQVLGGCVAGAL
Sm020025_Selmo1 TLRQLAAPGSTVTFHGRFEILSLSGAFLPPPAPVAVAGLTVALAGSQPGQVLGGSVVGVL
                ::** ::.*:.**::* ***:****::******   :.**: :**.. ***:**.*.* *

AT4G17800.1     TAAGPVIVIAASFTNVAYERLPLEEDEQQQ-QLGGGSNGGGNLFPEVAAGGGGGLPFFNL
pp033407_Pp1s48 TAASPVLVIATSFTGATYDRLPLADDEPPIMQVTTASGAQAMQAPDLSSYNP-STALQNL
Sm020025_Selmo1 MAASPVLVIAASFVGATYDRLPLEDEDPNQVASNNVSAASGVTS------DPCSMALFNL
                 **.**:***:**...:*:**** :::         * . .         .  . .: **

AT4G17800.1     -----PMNM-QPNVQLPVE---GWPGNSG--GRGPF-
pp033407_Pp1s48 YNIVPQTNPNLASQQAAQDVLNQWASGSGHTQRPQQY
Sm020025_Selmo1 -----AQNP-LANCQLPPDVL-AWAAAG---NRPPF-
                       *   .. * . :    *.. .    *
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     M A G L D L G T A F R Y V N H Q L H R P D L H L H H N S S S D D V T P G A G M G H F T V D D E D N N N N H Q G L D L A S
pp033407_Pp1s48    M T Q I D - - A P W G I V R A R Y E K P W E D K H K Q A A P E N - - - - - - F G H V C M - - - - - - - - - - - - - - - A
Sm020025_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G17800.1     G - - G G S - - G S - - S G G G G G H G - - - - - - - - - - - - - - - - - - - - - - - - - G G G D V V G R R P R G R P P
pp033407_Pp1s48    G V E G G T E A G S R P S P Q G G N S S D E D Q S G S S V P G R P R K R S K G K S R P P P G P G E P S - R K P R G R P P
Sm020025_Selmo1    - - - G G M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A G E I V - R K P R G R P P
 
AT4G17800.1     G S K N K P K P P V I I T R E S A N T L R A H I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V
pp033407_Pp1s48    G S K N K P K P P V I I T R E N G N A M R P H V L E V A S G H D V W E S V T D F A R R R Q R G V C V M G G S G T V T N V
Sm020025_Selmo1    G S K N K P K P P I I I T R D S G N A M R P H V L E I A G G C D V G E T L A A F A R R R Q R G L C V L G G S G T V A N V
 
AT4G17800.1     S I R Q P S A A G A V V T L Q G T F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q - G Q V V G G S V V G E L
pp033407_Pp1s48    T L R Q P T T P G A T V T I H G R F E I I S L S G S Y L P P P A P S P P T G L T I S F A G A S - G Q V L G G C V A G A L
Sm020025_Selmo1    T L R Q L A A P G S T V T F H G R F E I L S L S G A F L P P P A P V A V A G L T V A L A G S Q P G Q V L G G S V V G V L
 
AT4G17800.1     T A A G P V I V I A A S F T N V A Y E R L P L E E D E Q Q Q - Q L G G G S N G G G N L F P E V A A G G G G G L P F F N L
pp033407_Pp1s48    T A A S P V L V I A T S F T G A T Y D R L P L A D D E P P I M Q V T T A S G A Q A M Q A P D L S S Y N P - S T A L Q N L
Sm020025_Selmo1    M A A S P V L V I A A S F V G A T Y D R L P L E D E D P N Q V A S N N V S A A S G V T S - - - - - - D P C S M A L F N L
 
AT4G17800.1     - - - - - P M N M - Q P N V Q L P V E - - - G W P G N S G - - G R G P F -
pp033407_Pp1s48    Y N I V P Q T N P N L A S Q Q A A Q D V L N Q W A S G S G H T Q R P Q Q Y
Sm020025_Selmo1    - - - - - A Q N P - L A N C Q L P P D V L - A W A A A G - - - N R P P F -
 
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