fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp033407 not found in 311aa AT4G17800.1 1st_1st 0.394299287 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     MAGLDLGTAFRYVNHQLHRPDLHLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGLDLAS
pp033407_Pp1s48 MTQID--APWGIVRARYEKPWEDKHKQAAPEN------FGHVCM---------AGVEGGT
                *: :*  :.:  *. : .:*  . *::::.::      :**. :          *:: .:

AT4G17800.1     GGGSGSSGGGGGHG----GGGDVVG--------------------RRPRGRPPGSKNKPK
pp033407_Pp1s48 EAGSRPSPQGGNSSDEDQSGSSVPGRPRKRSKGKSRPPPGPGEPSRKPRGRPPGSKNKPK
                 .** .*  **. .    .*..* *                    *:*************

AT4G17800.1     PPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSA
pp033407_Pp1s48 PPVIITRENGNAMRPHVLEVASGHDVWESVTDFARRRQRGVCVMGGSGTVTNVTLRQPTT
                ********..*::*.*:***:.* **::.*: :*******:**:.********::***::

AT4G17800.1     AGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIV
pp033407_Pp1s48 PGATVTIHGRFEIISLSGSYLPPPAPSPPTGLTISFAGASGQVLGGCVAGALTAASPVLV
                .**.**::* ***:*****:******. .*.*** :**..***:**.*.* ****.**:*

AT4G17800.1     IAASFTNVAYERLPLEEDEQQ-QQLGGGSNGGGNLFPEVAAGGGGGLP------FFNLPM
pp033407_Pp1s48 IATSFTGATYDRLPLADDEPPIMQVTTASGAQAMQAPDLSSYN----PSTALQNLYNIVP
                **:***..:*:**** :**    *:  .*.. .   *:::: .    *      ::*:  

AT4G17800.1     NMQPNV------QLPVEGWPGNSG-GRGPF--
pp033407_Pp1s48 QTNPNLASQQAAQDVLNQWASGSGHTQRPQQY
                : :**:      *  :: *...**  : *
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     M A G L D L G T A F R Y V N H Q L H R P D L H L H H N S S S D D V T P G A G M G H F T V D D E D N N N N H Q G L D L A S
pp033407_Pp1s48    M T Q I D - - A P W G I V R A R Y E K P W E D K H K Q A A P E N - - - - - - F G H V C M - - - - - - - - - A G V E G G T
 
AT4G17800.1     G G G S G S S G G G G G H G - - - - G G G D V V G - - - - - - - - - - - - - - - - - - - - R R P R G R P P G S K N K P K
pp033407_Pp1s48    E A G S R P S P Q G G N S S D E D Q S G S S V P G R P R K R S K G K S R P P P G P G E P S R K P R G R P P G S K N K P K
 
AT4G17800.1     P P V I I T R E S A N T L R A H I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A
pp033407_Pp1s48    P P V I I T R E N G N A M R P H V L E V A S G H D V W E S V T D F A R R R Q R G V C V M G G S G T V T N V T L R Q P T T
 
AT4G17800.1     A G A V V T L Q G T F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V
pp033407_Pp1s48    P G A T V T I H G R F E I I S L S G S Y L P P P A P S P P T G L T I S F A G A S G Q V L G G C V A G A L T A A S P V L V
 
AT4G17800.1     I A A S F T N V A Y E R L P L E E D E Q Q - Q Q L G G G S N G G G N L F P E V A A G G G G G L P - - - - - - F F N L P M
pp033407_Pp1s48    I A T S F T G A T Y D R L P L A D D E P P I M Q V T T A S G A Q A M Q A P D L S S Y N - - - - P S T A L Q N L Y N I V P
 
AT4G17800.1     N M Q P N V - - - - - - Q L P V E G W P G N S G - G R G P F - -
pp033407_Pp1s48    Q T N P N L A S Q Q A A Q D V L N Q W A S G S G H T Q R P Q Q Y
 
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