fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009910 not found in 298aa AT4G17800.1 not_1st 0.691211401 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     MAGLDLGTAFRYVNHQL-HRPDLHLHHNSSSDDVTP---GAGM---GHFTVDDEDNNNNH
pt009910_POPTR_ MAGLDLGTTSRYV-HQLHHRPDLQLQHQPDPEDEDPNRAGDGLGSVGRFSTDHNPDDGLH
                ********: *** *** *****:*:*:...:*  *   * *:   *:*:.*.: ::. *

AT4G17800.1     QGLDL-ASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAH
pt009910_POPTR_ QGLDLVATAANSGP----------GDIMARRPRGRPPGSKNKEKPPIIITRESANTLRAH
                ***** *:...**.          **::.************* ***:*************

AT4G17800.1     ILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSL
pt009910_POPTR_ ILEVGSGCDVFECVGNYARRRQRGICILSGAGTVTNVSIRQPAAAGSIVTLHGRFEILSL
                **** .*****:**..**********:***:***********:***::***:* ******

AT4G17800.1     SGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLE
pt009910_POPTR_ SGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLD
                ***********************************************************:

AT4G17800.1     EDEQQQQLGGGSNGGGNLFPEVAAGGG----------------GGLPFFNLPMNMQPNVQ
pt009910_POPTR_ EDDQLLMQSGGGGGGG-------AGGGIGVGNNGPFNEAGAASGGLPFFNLPLNMPSNVQ
                **:*    .**..***       ****                *********:** .***

AT4G17800.1     LPVEGWPGNSGGRGPF
pt009910_POPTR_ LPVNGWAGNSGGRAPF
                ***:**.******.**
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     M A G L D L G T A F R Y V N H Q L - H R P D L H L H H N S S S D D V T P - - - G A G M - - - G H F T V D D E D N N N N H
pt009910_POPTR_    M A G L D L G T T S R Y V - H Q L H H R P D L Q L Q H Q P D P E D E D P N R A G D G L G S V G R F S T D H N P D D G L H
 
AT4G17800.1     Q G L D L - A S G G G S G S S G G G G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I I T R E S A N T L R A H
pt009910_POPTR_    Q G L D L V A T A A N S G P - - - - - - - - - - G D I M A R R P R G R P P G S K N K E K P P I I I T R E S A N T L R A H
 
AT4G17800.1     I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A A G A V V T L Q G T F E I L S L
pt009910_POPTR_    I L E V G S G C D V F E C V G N Y A R R R Q R G I C I L S G A G T V T N V S I R Q P A A A G S I V T L H G R F E I L S L
 
AT4G17800.1     S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L E
pt009910_POPTR_    S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L D
 
AT4G17800.1     E D E Q Q Q Q L G G G S N G G G N L F P E V A A G G G - - - - - - - - - - - - - - - - G G L P F F N L P M N M Q P N V Q
pt009910_POPTR_    E D D Q L L M Q S G G G G G G G - - - - - - - A G G G I G V G N N G P F N E A G A A S G G L P F F N L P L N M P S N V Q
 
AT4G17800.1     L P V E G W P G N S G G R G P F
pt009910_POPTR_    L P V N G W A G N S G G R A P F
 
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