fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032727 not found in 298aa AT4G17800.1 1st_1st 0.722090261 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     MAGLDLGTAFRYVNHQL-HRPDLHLHHNSSSDD---VTPGAGM-----GHFTVDDEDNNN
pt032727_POPTR_ MAGLDLGTTSRYV-HQLHHRPDLHLQHQPDPEDHDSNRAGGGLGGGSGGHFSTDHHHDDG
                ********: *** *** *******:*:...:*     .*.*:     ***:.*...::.

AT4G17800.1     NHQGLDLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRA
pt032727_POPTR_ SHQGLDLVAAAAN---------SGQGDLVGRRPRGRPAGSKNKPKPPVIITRESANTLRA
                .******.:....         .* **:*********.**********************

AT4G17800.1     HILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILS
pt032727_POPTR_ HILEVGNGCDVFECVANYARRRQRGICILSGAGTVTNVSIRQPAAAGAIVTLHGRFEILS
                ***** ******:***.**********:***:***********:****:***:* *****

AT4G17800.1     LSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPL
pt032727_POPTR_ LSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPL
                ************************************************************

AT4G17800.1     EEDEQQQQLGGGSNGGGNLFPEVAAGGG-------------GGLPFFNLPMNMQPNVQLP
pt032727_POPTR_ DEDDQLQMQSGGGGGGG------AGGGGVGNSPFNESGTPSGGLPFFNLPLNMTANVQLP
                :**:* *  .**..***      *.***             *********:** .*****

AT4G17800.1     VEGWPGNSGGRGPF
pt032727_POPTR_ VDGWGGNSGGRVPF
                *:** ****** **
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     M A G L D L G T A F R Y V N H Q L - H R P D L H L H H N S S S D D - - - V T P G A G M - - - - - G H F T V D D E D N N N
pt032727_POPTR_    M A G L D L G T T S R Y V - H Q L H H R P D L H L Q H Q P D P E D H D S N R A G G G L G G G S G G H F S T D H H H D D G
 
AT4G17800.1     N H Q G L D L A S G G G S G S S G G G G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I I T R E S A N T L R A
pt032727_POPTR_    S H Q G L D L V A A A A N - - - - - - - - - S G Q G D L V G R R P R G R P A G S K N K P K P P V I I T R E S A N T L R A
 
AT4G17800.1     H I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A A G A V V T L Q G T F E I L S
pt032727_POPTR_    H I L E V G N G C D V F E C V A N Y A R R R Q R G I C I L S G A G T V T N V S I R Q P A A A G A I V T L H G R F E I L S
 
AT4G17800.1     L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L
pt032727_POPTR_    L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L
 
AT4G17800.1     E E D E Q Q Q Q L G G G S N G G G N L F P E V A A G G G - - - - - - - - - - - - - G G L P F F N L P M N M Q P N V Q L P
pt032727_POPTR_    D E D D Q L Q M Q S G G G G G G G - - - - - - A G G G G V G N S P F N E S G T P S G G L P F F N L P L N M T A N V Q L P
 
AT4G17800.1     V E G W P G N S G G R G P F
pt032727_POPTR_    V D G W G G N S G G R V P F
 
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