fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030528 not found in 455aa AT4G17800.1 not_1st 0.496437054 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     -----------------------------------------------------MAGLDLG
Sb030528_Sorbi1 PLQENKHHTNPKEIHPLLALAVYYFHHHHHHRTTSSTRAAELLILSLFSYPRKMAGLDLG
                                                                     *******

AT4G17800.1     T-AFRYVNHQ-LHRPDLHLHHNS-------SSDD----VTPGAGMGHFTVDDEDNNNNHQ
Sb030528_Sorbi1 TSSYLHQQHQHHHQVPLHLHHDDGVGAGGGGSDDGQDSLSPGSGGG--------------
                * :: : :**  *:  *****:.       .***    ::**:* *              

AT4G17800.1     GLDLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHIL
Sb030528_Sorbi1 ------GGGTPSSAGGAGI-GGGEIVARRPRGRPPGSKNKPKPPVIITRESANALRAHIL
                      ***: **.**.*  ***::*.**************************:******

AT4G17800.1     EVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAG------AVVTLQGTFE
Sb030528_Sorbi1 EVAAGCDVFEALTAYARRRQRGVCVLSAAGTVANVTLRQPQSSQTGPTSPAVATLHGRFE
                **: *****:.:::********:****.:***:**::***.::       **.**:* **

AT4G17800.1     ILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYER
Sb030528_Sorbi1 ILSLAGSFLPPPAPPGATSLAAFLAGGQGQVVGGSVAGALIAAGPVVVVAASFSNVAYER
                ****:***************: **************.* * *****:*:****:******

AT4G17800.1     LPLEEDEQ---QQQLGGGSNGGGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLPVE---GW
Sb030528_Sorbi1 LPLEDGDEVAPPPPAGGDQQQPGVPFDPAAAAAAGGLPFFNLPMGMPP---MPMDGHAGW
                ****:.::       **..:  *  *  .**...**********.* *   :*::   **

AT4G17800.1     ----PGNSGGRGPF-
Sb030528_Sorbi1 PAGAPGGGVGRPPFS
                    **.. ** **
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A G L D L G
Sb030528_Sorbi1    P L Q E N K H H T N P K E I H P L L A L A V Y Y F H H H H H H R T T S S T R A A E L L I L S L F S Y P R K M A G L D L G
 
AT4G17800.1     T - A F R Y V N H Q - L H R P D L H L H H N S - - - - - - - S S D D - - - - V T P G A G M G H F T V D D E D N N N N H Q
Sb030528_Sorbi1    T S S Y L H Q Q H Q H H H Q V P L H L H H D D G V G A G G G G S D D G Q D S L S P G S G G G - - - - - - - - - - - - - -
 
AT4G17800.1     G L D L A S G G G S G S S G G G G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I I T R E S A N T L R A H I L
Sb030528_Sorbi1    - - - - - - G G G T P S S A G G A G I - G G G E I V A R R P R G R P P G S K N K P K P P V I I T R E S A N A L R A H I L
 
AT4G17800.1     E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A A G - - - - - - A V V T L Q G T F E
Sb030528_Sorbi1    E V A A G C D V F E A L T A Y A R R R Q R G V C V L S A A G T V A N V T L R Q P Q S S Q T G P T S P A V A T L H G R F E
 
AT4G17800.1     I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R
Sb030528_Sorbi1    I L S L A G S F L P P P A P P G A T S L A A F L A G G Q G Q V V G G S V A G A L I A A G P V V V V A A S F S N V A Y E R
 
AT4G17800.1     L P L E E D E Q - - - Q Q Q L G G G S N G G G N L F P E V A A G G G G G L P F F N L P M N M Q P N V Q L P V E - - - G W
Sb030528_Sorbi1    L P L E D G D E V A P P P P A G G D Q Q Q P G V P F D P A A A A A A G G L P F F N L P M G M P P - - - M P M D G H A G W
 
AT4G17800.1     - - - - P G N S G G R G P F -
Sb030528_Sorbi1    P A G A P G G G V G R P P F S
 
0