fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027062 not found in 595aa AT2G45430.1 not_not 0.467933491 III
Sb033333 not found in 547aa AT4G22810.1 not_not 0.403800475 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17800.1     -MAGLDLGTAFRYV-----------------------------NHQLHRPDLHLHHNSSS
Sb033333_Sorbi1 PAAPSSIGTNARSLARPCARPRTRVAGRATMDPAVAAAAAHGGGHHFAQPVAPFHH----
Sb027062_Sorbi1 ----DNLLINMR-------------------------------NHMQFRRKFDLHDTNSS
                     .:    *                               .*   :    :*.    

AT4G17800.1     --------------------DDV-----TPGAG-----MG----------------HFTV
Sb033333_Sorbi1 -----------------------------PFGG-----LGGHHHHLFPGQQHPAFQHFQE
Sb027062_Sorbi1 KRWKKRAKSLNHLSCVCVRADQLLERRRTATGGARVPSVGCFWRQL----------HVAE
                                             . .*     :*                *.  

AT4G17800.1     ------------------------------------------------------------
Sb033333_Sorbi1 QQRQLEL-----LGAGGG------------VPGG----------VNKQEL--GVG-----
Sb027062_Sorbi1 QVRRQSLEEAWIHSAGGGELRRLLRTRENSCTVGLCLCSEHVILLQRQPLVHGVGERRCH
                                                                            

AT4G17800.1     -----------DDEDNNNNHQGLDLASGGGSGSSGGGGGHG------GGGD---------
Sb033333_Sorbi1 ----------GDDSNNTINSAG---SNGSGDGAVAGADQQA------GGGDGDQ---QQQ
Sb027062_Sorbi1 YHHRPSRRERADDA----AAHHLPLPAGKVDGEARGFGRRGRREERAGEGEDLEAAVESD
                           **            . *  .*   * . :.      * *:         

AT4G17800.1     ---VVGRRPR---GRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARR
Sb033333_Sorbi1 QHALVMRRPR---GRPAGSKNKPKPPVIITRDSASALRAHVLEVAAGCDVVDSIAGFARR
Sb027062_Sorbi1 DGALGGRLPQGDVGDGAGAAEDADP----------ALPA------------------ARE
                   :  * *:   *  .*: :...*          :* *                  **.

AT4G17800.1     RQRGICVLSGSGTVTNVSIRQPSAA-GAVVTLQGTFEILSLSGSFLPP--PAP-------
Sb033333_Sorbi1 RQVGVCVLSASGSVANVCIRHSGAAPGAVVTMAGCFDILSLSGSFLPP--PAP-------
Sb027062_Sorbi1 RRDALGDVAAPGHLHDVRPERVGAVPG---DDDGRLRLV------LGPRRPAPRAARGAV
                *: .:  ::..* : :*  .: .*. *      * : ::      * *  ***       

AT4G17800.1     -----PGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDE-Q
Sb033333_Sorbi1 -----PAATGLTVYLSGGQGQVVGGTVAGPLLASGPVVIVAACFGNAAYERLPLDDDEPP
Sb027062_Sorbi1 SSAVWPAATR-----RGNQRQLVASTAA----AATPVAVSAVLVIMLVVVALDV------
                     *.**       *.* *:*..:..    *: ** : *. .   .   * :      

AT4G17800.1     QQQL-------GGGSNGGGNLFPEVAAGGGGGLPFFN-LPMNMQPNVQLPVEGW------
Sb033333_Sorbi1 QQQLLQQALPPPQGMAGASSSSPPPPLSLPGQHPLADQLPHSLMNGLPLPADAYAW----
Sb027062_Sorbi1 --------------AAGAEHPWPAATMVVLGLELQLVMLLLLLLLEMVMEVAGVEWWRKM
                                *.    *  .    *       *   :   : : . .       

AT4G17800.1     -----------PGNSG-GR-GPF
Sb033333_Sorbi1 ---------ANPGGSGAGRVAPY
Sb027062_Sorbi1 VTVYGCCDRIHPLT---GRIAN-
                           *     ** .
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     - M A G L D L G T A F R Y V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N H Q L H R P D L H L H H N S S S
Sb033333_Sorbi1    P A A P S S I G T N A R S L A R P C A R P R T R V A G R A T M D P A V A A A A A H G G G H H F A Q P V A P F H H - - - -
Sb027062_Sorbi1    - - - - D N L L I N M R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N H M Q F R R K F D L H D T N S S
 
AT4G17800.1     - - - - - - - - - - - - - - - - - - - - D D V - - - - - T P G A G - - - - - M G - - - - - - - - - - - - - - - - H F T V
Sb033333_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P F G G - - - - - L G G H H H H L F P G Q Q H P A F Q H F Q E
Sb027062_Sorbi1    K R W K K R A K S L N H L S C V C V R A D Q L L E R R R T A T G G A R V P S V G C F W R Q L - - - - - - - - - - H V A E
 
AT4G17800.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033333_Sorbi1    Q Q R Q L E L - - - - - L G A G G G - - - - - - - - - - - - V P G G - - - - - - - - - - V N K Q E L - - G V G - - - - -
Sb027062_Sorbi1    Q V R R Q S L E E A W I H S A G G G E L R R L L R T R E N S C T V G L C L C S E H V I L L Q R Q P L V H G V G E R R C H
 
AT4G17800.1     - - - - - - - - - - - D D E D N N N N H Q G L D L A S G G G S G S S G G G G G H G - - - - - - G G G D - - - - - - - - -
Sb033333_Sorbi1    - - - - - - - - - - G D D S N N T I N S A G - - - S N G S G D G A V A G A D Q Q A - - - - - - G G G D G D Q - - - Q Q Q
Sb027062_Sorbi1    Y H H R P S R R E R A D D A - - - - A A H H L P L P A G K V D G E A R G F G R R G R R E E R A G E G E D L E A A V E S D
 
AT4G17800.1     - - - V V G R R P R - - - G R P P G S K N K P K P P V I I T R E S A N T L R A H I L E V T N G C D V F D C V A T Y A R R
Sb033333_Sorbi1    Q H A L V M R R P R - - - G R P A G S K N K P K P P V I I T R D S A S A L R A H V L E V A A G C D V V D S I A G F A R R
Sb027062_Sorbi1    D G A L G G R L P Q G D V G D G A G A A E D A D P - - - - - - - - - - A L P A - - - - - - - - - - - - - - - - - - A R E
 
AT4G17800.1     R Q R G I C V L S G S G T V T N V S I R Q P S A A - G A V V T L Q G T F E I L S L S G S F L P P - - P A P - - - - - - -
Sb033333_Sorbi1    R Q V G V C V L S A S G S V A N V C I R H S G A A P G A V V T M A G C F D I L S L S G S F L P P - - P A P - - - - - - -
Sb027062_Sorbi1    R R D A L G D V A A P G H L H D V R P E R V G A V P G - - - D D D G R L R L V - - - - - - L G P R R P A P R A A R G A V
 
AT4G17800.1     - - - - - P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L E E D E - Q
Sb033333_Sorbi1    - - - - - P A A T G L T V Y L S G G Q G Q V V G G T V A G P L L A S G P V V I V A A C F G N A A Y E R L P L D D D E P P
Sb027062_Sorbi1    S S A V W P A A T R - - - - - R G N Q R Q L V A S T A A - - - - A A T P V A V S A V L V I M L V V V A L D V - - - - - -
 
AT4G17800.1     Q Q Q L - - - - - - - G G G S N G G G N L F P E V A A G G G G G L P F F N - L P M N M Q P N V Q L P V E G W - - - - - -
Sb033333_Sorbi1    Q Q Q L L Q Q A L P P P Q G M A G A S S S S P P P P L S L P G Q H P L A D Q L P H S L M N G L P L P A D A Y A W - - - -
Sb027062_Sorbi1    - - - - - - - - - - - - - - A A G A E H P W P A A T M V V L G L E L Q L V M L L L L L L L E M V M E V A G V E W W R K M
 
AT4G17800.1     - - - - - - - - - - - P G N S G - G R - G P F
Sb033333_Sorbi1    - - - - - - - - - A N P G G S G A G R V A P Y
Sb027062_Sorbi1    V T V Y G C C D R I H P L T - - - G R I A N -
 
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