fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029863 not found in 559aa AT4G17800.1 1st_1st 0.532066508 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     ---MAGLDLGT-AFRYVNHQLH--RPDLHLHHNSS-----SDDVTPGAGMGHFTVDDEDN
Sb029863_Sorbi1 QKSMAGLDLGTAATRYV-HQLHHLHPDLQLQHSYAKQPEPSEDDPHGSGGG-------GG
                   ******** * *** ****  :***:*:*. :     *:* . *:* *       ..

AT4G17800.1     NNNHQGLDLASGGGSGSSGGG-----GGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRE
Sb029863_Sorbi1 NSNNGGPYGEHDGGSSSSGPGAGDAPGGSGGNGEMVARRPRGRPPGSKNKPKPPVIITRE
                *.*: *     .***.*** *     ** **.*::*.***********************

AT4G17800.1     SANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSA-AGAVVTL
Sb029863_Sorbi1 SANTLRAHILEVGSGCDVFESVSTYARRRQRGVCVLSGSGVVTNVTLRQPSAPTGAVVTL
                ************ .*****:.*:*********:*******.****::***** :******

AT4G17800.1     QGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTN
Sb029863_Sorbi1 HGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALYAAGPVIVIAASFAN
                :* ************************************.*** * ************:*

AT4G17800.1     VAYERLPLEEDE--------QQQQLGGGSNGGGNLFPEVAAGGG--------GGLPFFNL
Sb029863_Sorbi1 VAYERLPLEEEEAQAAPPGLQMQPPGGGVDGAGG-----GMGGGPFPPDPSAAGLPFFNL
                **********:*        * *  *** :*.*.     . ***        .*******

AT4G17800.1     PMNMQP--NVQLPV----EGWPGNSGGRGPF
Sb029863_Sorbi1 PLNNMAGGGSQLPPGADGHGW---AGARPPF
                *:*  .  . ***     .**   :*.* **
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     - - - M A G L D L G T - A F R Y V N H Q L H - - R P D L H L H H N S S - - - - - S D D V T P G A G M G H F T V D D E D N
Sb029863_Sorbi1    Q K S M A G L D L G T A A T R Y V - H Q L H H L H P D L Q L Q H S Y A K Q P E P S E D D P H G S G G G - - - - - - - G G
 
AT4G17800.1     N N N H Q G L D L A S G G G S G S S G G G - - - - - G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I I T R E
Sb029863_Sorbi1    N S N N G G P Y G E H D G G S S S S G P G A G D A P G G S G G N G E M V A R R P R G R P P G S K N K P K P P V I I T R E
 
AT4G17800.1     S A N T L R A H I L E V T N G C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A - A G A V V T L
Sb029863_Sorbi1    S A N T L R A H I L E V G S G C D V F E S V S T Y A R R R Q R G V C V L S G S G V V T N V T L R Q P S A P T G A V V T L
 
AT4G17800.1     Q G T F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N
Sb029863_Sorbi1    H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G N V V G A L Y A A G P V I V I A A S F A N
 
AT4G17800.1     V A Y E R L P L E E D E - - - - - - - - Q Q Q Q L G G G S N G G G N L F P E V A A G G G - - - - - - - - G G L P F F N L
Sb029863_Sorbi1    V A Y E R L P L E E E E A Q A A P P G L Q M Q P P G G G V D G A G G - - - - - G M G G G P F P P D P S A A G L P F F N L
 
AT4G17800.1     P M N M Q P - - N V Q L P V - - - - E G W P G N S G G R G P F
Sb029863_Sorbi1    P L N N M A G G G S Q L P P G A D G H G W - - - A G A R P P F
 
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