fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050287 not found in 268aa AT4G17800.1 1st_1st 0.629453681 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17800.1     MAGLDLGTAFRYVNHQLHRPDLHLHHNSSSDDVTPGAGMGHFTVDDEDNN-NNHQGLDLA
gm050287_Glyma1 MAGIDLGSASHFVHHRLERPDLEDDENQQ----------------DQDNNLNNHEGLDLV
                ***:***:* ::*:*:*.****. ..*..                *:*** ***:****.

AT4G17800.1     SGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNG
gm050287_Glyma1 T-----------PNSGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSG
                :            :.* ****************************************:.*

AT4G17800.1     CDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPP
gm050287_Glyma1 CDVFESVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPP
                ****:.******:*****************::***:********:* *************

AT4G17800.1     PAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDE--QQ
gm050287_Glyma1 PAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEESMQM
                **********:**.*********.*** *.*:*******:************:*:*  * 

AT4G17800.1     QQ----LGGGSNGGG---NLFPEVAAGGGGGLPFFNLPMNMQPNVQLPVEGWPGNSGGRG
gm050287_Glyma1 QQGQSSAGGGGSGGGVSNNSFPDPSS----GLPFFNLPLNMP---QLPVDGWAGNSGGRQ
                **     ***..***   * **: ::    ********:**    ****:**.****** 

AT4G17800.1     PF
gm050287_Glyma1 SY
                .:
BoxShade v3.31 C (beta, 970507) Output
AT4G17800.1     M A G L D L G T A F R Y V N H Q L H R P D L H L H H N S S S D D V T P G A G M G H F T V D D E D N N - N N H Q G L D L A
gm050287_Glyma1    M A G I D L G S A S H F V H H R L E R P D L E D D E N Q Q - - - - - - - - - - - - - - - - D Q D N N L N N H E G L D L V
 
AT4G17800.1     S G G G S G S S G G G G G H G G G G D V V G R R P R G R P P G S K N K P K P P V I I T R E S A N T L R A H I L E V T N G
gm050287_Glyma1    T - - - - - - - - - - - P N S G P G D V V G R R P R G R P P G S K N K P K P P V I I T R E S A N T L R A H I L E V S S G
 
AT4G17800.1     C D V F D C V A T Y A R R R Q R G I C V L S G S G T V T N V S I R Q P S A A G A V V T L Q G T F E I L S L S G S F L P P
gm050287_Glyma1    C D V F E S V A T Y A R K R Q R G I C V L S G S G T V T N V T L R Q P A A A G A V V T L H G R F E I L S L S G S F L P P
 
AT4G17800.1     P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A A S F T N V A Y E R L P L E E D E - - Q Q
gm050287_Glyma1    P A P P G A T S L T V F L G G G Q G Q V V G G N V V G P L V A S G P V I V I A S S F T N V A Y E R L P L D E E E S M Q M
 
AT4G17800.1     Q Q - - - - L G G G S N G G G - - - N L F P E V A A G G G G G L P F F N L P M N M Q P N V Q L P V E G W P G N S G G R G
gm050287_Glyma1    Q Q G Q S S A G G G G S G G G V S N N S F P D P S S - - - - G L P F F N L P L N M P - - - Q L P V D G W A G N S G G R Q
 
AT4G17800.1     P F
gm050287_Glyma1    S Y
 
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