Input
| Putative repression domain
|
|
AT4G17810.1 |
GTSVDELDLELRLGHH at 191/204 in AT4G17810.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pp033324 |
GEQEDKLDLELRLGQS in 264/278 |
AT4G17810.1 |
1st_1st |
0.210772833 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G17810.1 MNGG-----------------AW-----------MWNPNKIEELEDDDESWEVKAFEQDT
pp033324_Pp1s1_ MATGHIMHQREVHQQEWPAMASWAAPGAQVCGGNTWS-KRMAMNAPDNESWEVRAFAEDT
* * :* *. ::: *:*****:** :**
AT4G17810.1 KGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDR--------------ASSRAH
pp033324_Pp1s1_ --CCSGAQWPPRSYSCSFCGREFRTAQALGGHMNVHRRERVHANQLAQLRNAANASSQSL
**: ******:*.** ****:*************:* ***::
AT4G17810.1 QGSTVAAAARSGHGGMLL-------------NSCAPPLPTTTLIIQSTASNIEGLSH---
pp033324_Pp1s1_ RGS-LSASSKVGCNDAEVAELSWAQCYSKPRSASSAPLP------------LSAPSHTAD
:** ::*::: * .. : .:.:.*** :.. **
AT4G17810.1 FYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRL--------------
pp033324_Pp1s1_ FLTSKSVDAFMPGANRMIS--GSVVFPSSPSEKSISSSSYERIPDLGTKPLLQSMPDFVR
* :. ..:: .:. *:. *:. **.* *: .*. * * *
AT4G17810.1 --IEYSTGDDESIGS----------------MKEATGTSVDELDLELRLGHHPP--
pp033324_Pp1s1_ EALSHSSGCHPSEKSWWNSGSNVNFEKNPLRLNKVMGEQEDKLDLELRLGQSSCAV
:.:*:* . * * :::. * . *:********: .
BoxShade v3.31 C (beta, 970507) Output
AT4G17810.1 |
M |
N |
G |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
W |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
W |
N |
P |
N |
K |
I |
E |
E |
L |
E |
D |
D |
D |
E |
S |
W |
E |
V |
K |
A |
F |
E |
Q |
D |
T |
pp033324_Pp1s1_ |
M |
A |
T |
G |
H |
I |
M |
H |
Q |
R |
E |
V |
H |
Q |
Q |
E |
W |
P |
A |
M |
A |
S |
W |
A |
A |
P |
G |
A |
Q |
V |
C |
G |
G |
N |
T |
W |
S |
- |
K |
R |
M |
A |
M |
N |
A |
P |
D |
N |
E |
S |
W |
E |
V |
R |
A |
F |
A |
E |
D |
T |
|
AT4G17810.1 |
K |
G |
N |
I |
S |
G |
T |
T |
W |
P |
P |
R |
S |
Y |
T |
C |
N |
F |
C |
R |
R |
E |
F |
R |
S |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
V |
H |
R |
R |
D |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
S |
S |
R |
A |
H |
pp033324_Pp1s1_ |
- |
- |
C |
C |
S |
G |
A |
Q |
W |
P |
P |
R |
S |
Y |
S |
C |
S |
F |
C |
G |
R |
E |
F |
R |
T |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
V |
H |
R |
R |
E |
R |
V |
H |
A |
N |
Q |
L |
A |
Q |
L |
R |
N |
A |
A |
N |
A |
S |
S |
Q |
S |
L |
|
AT4G17810.1 |
Q |
G |
S |
T |
V |
A |
A |
A |
A |
R |
S |
G |
H |
G |
G |
M |
L |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
S |
C |
A |
P |
P |
L |
P |
T |
T |
T |
L |
I |
I |
Q |
S |
T |
A |
S |
N |
I |
E |
G |
L |
S |
H |
- |
- |
- |
pp033324_Pp1s1_ |
R |
G |
S |
- |
L |
S |
A |
S |
S |
K |
V |
G |
C |
N |
D |
A |
E |
V |
A |
E |
L |
S |
W |
A |
Q |
C |
Y |
S |
K |
P |
R |
S |
A |
S |
S |
A |
P |
L |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
S |
A |
P |
S |
H |
T |
A |
D |
|
AT4G17810.1 |
F |
Y |
Q |
L |
Q |
N |
P |
S |
G |
I |
F |
G |
N |
S |
G |
D |
M |
V |
N |
L |
Y |
G |
T |
T |
S |
F |
P |
P |
S |
N |
L |
P |
F |
S |
M |
L |
N |
S |
P |
V |
E |
V |
P |
P |
R |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pp033324_Pp1s1_ |
F |
L |
T |
S |
K |
S |
V |
D |
A |
F |
M |
P |
G |
A |
N |
R |
M |
I |
S |
- |
- |
G |
S |
V |
V |
F |
P |
S |
S |
P |
S |
E |
K |
S |
I |
S |
S |
S |
S |
Y |
E |
R |
I |
P |
D |
L |
G |
T |
K |
P |
L |
L |
Q |
S |
M |
P |
D |
F |
V |
R |
|
AT4G17810.1 |
- |
- |
I |
E |
Y |
S |
T |
G |
D |
D |
E |
S |
I |
G |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
K |
E |
A |
T |
G |
T |
S |
V |
D |
E |
L |
D |
L |
E |
L |
R |
L |
G |
H |
H |
P |
P |
- |
- |
pp033324_Pp1s1_ |
E |
A |
L |
S |
H |
S |
S |
G |
C |
H |
P |
S |
E |
K |
S |
W |
W |
N |
S |
G |
S |
N |
V |
N |
F |
E |
K |
N |
P |
L |
R |
L |
N |
K |
V |
M |
G |
E |
Q |
E |
D |
K |
L |
D |
L |
E |
L |
R |
L |
G |
Q |
S |
S |
C |
A |
V |
|
|