fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17810.1 GTSVDELDLELRLGHH at 191/204 in AT4G17810.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp033324 GEQEDKLDLELRLGQS in 264/278 AT4G17810.1 1st_1st 0.210772833 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17810.1     MNGG-----------------AW-----------MWNPNKIEELEDDDESWEVKAFEQDT
pp033324_Pp1s1_ MATGHIMHQREVHQQEWPAMASWAAPGAQVCGGNTWS-KRMAMNAPDNESWEVRAFAEDT
                *  *                 :*            *. :::     *:*****:** :**

AT4G17810.1     KGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDR--------------ASSRAH
pp033324_Pp1s1_ --CCSGAQWPPRSYSCSFCGREFRTAQALGGHMNVHRRERVHANQLAQLRNAANASSQSL
                    **: ******:*.** ****:*************:*              ***:: 

AT4G17810.1     QGSTVAAAARSGHGGMLL-------------NSCAPPLPTTTLIIQSTASNIEGLSH---
pp033324_Pp1s1_ RGS-LSASSKVGCNDAEVAELSWAQCYSKPRSASSAPLP------------LSAPSHTAD
                :** ::*::: * ..  :             .:.:.***            :.. **   

AT4G17810.1     FYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRL--------------
pp033324_Pp1s1_ FLTSKSVDAFMPGANRMIS--GSVVFPSSPSEKSISSSSYERIPDLGTKPLLQSMPDFVR
                *   :. ..:: .:. *:.  *:. **.*    *: .*. *  * *              

AT4G17810.1     --IEYSTGDDESIGS----------------MKEATGTSVDELDLELRLGHHPP--
pp033324_Pp1s1_ EALSHSSGCHPSEKSWWNSGSNVNFEKNPLRLNKVMGEQEDKLDLELRLGQSSCAV
                  :.:*:* . *  *                :::. * . *:********: .
BoxShade v3.31 C (beta, 970507) Output
AT4G17810.1     M N G G - - - - - - - - - - - - - - - - - A W - - - - - - - - - - - M W N P N K I E E L E D D D E S W E V K A F E Q D T
pp033324_Pp1s1_    M A T G H I M H Q R E V H Q Q E W P A M A S W A A P G A Q V C G G N T W S - K R M A M N A P D N E S W E V R A F A E D T
 
AT4G17810.1     K G N I S G T T W P P R S Y T C N F C R R E F R S A Q A L G G H M N V H R R D R - - - - - - - - - - - - - - A S S R A H
pp033324_Pp1s1_    - - C C S G A Q W P P R S Y S C S F C G R E F R T A Q A L G G H M N V H R R E R V H A N Q L A Q L R N A A N A S S Q S L
 
AT4G17810.1     Q G S T V A A A A R S G H G G M L L - - - - - - - - - - - - - N S C A P P L P T T T L I I Q S T A S N I E G L S H - - -
pp033324_Pp1s1_    R G S - L S A S S K V G C N D A E V A E L S W A Q C Y S K P R S A S S A P L P - - - - - - - - - - - - L S A P S H T A D
 
AT4G17810.1     F Y Q L Q N P S G I F G N S G D M V N L Y G T T S F P P S N L P F S M L N S P V E V P P R L - - - - - - - - - - - - - -
pp033324_Pp1s1_    F L T S K S V D A F M P G A N R M I S - - G S V V F P S S P S E K S I S S S S Y E R I P D L G T K P L L Q S M P D F V R
 
AT4G17810.1     - - I E Y S T G D D E S I G S - - - - - - - - - - - - - - - - M K E A T G T S V D E L D L E L R L G H H P P - -
pp033324_Pp1s1_    E A L S H S S G C H P S E K S W W N S G S N V N F E K N P L R L N K V M G E Q E D K L D L E L R L G Q S S C A V
 
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