fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17810.1 GTSVDELDLELRLGHH at 191/204 in AT4G17810.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011576 ELANEELDLELRLGHR in 226/239 AT4G17810.1 1st_1st 0.351288056 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17810.1     -------------------------------MNGGAWMWNPNKIEELEDDDESWEVKAFE
pt011576_POPTR_ MAAEIGLLSLTQLQNLPQSHQNQYQHQRNPSETPSFWMWNPKQTQE---DDDSWEVRAFA
                                                . . *****:: :*   **:****:** 

AT4G17810.1     QDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQ---GSTVAAA
pt011576_POPTR_ EDT-GNINGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRA--RLHQTQPGSTNPHS
                :** ***.***********.************************  * **   *** . :

AT4G17810.1     ARSGHGGMLLNSCAPPLPTTTLII--QSTASNIEGLSHFYQLQNPSGIF----------G
pt011576_POPTR_ STSSSS------------SSTLIIPTQEFPPN-SGLCLLYQLPNPNGVFTPTNMTACSID
                : *. .            ::****  *. ..* .**. :*** **.*:*          .

AT4G17810.1     NSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRLIE---YSTGDDESIGSMKEATGT---
pt011576_POPTR_ SSSTLISI---TPYPHNNLVGPSLNFPV-APPEISTSHCYSNIKAEPSASTDHSNGIKNN
                .*. ::.:   *.:* .**  . ** ** .**.:     **. . *. .* ..:.*    

AT4G17810.1     -----SVDELDLELRLGHHPP-
pt011576_POPTR_ NCKELANEELDLELRLGHRSSS
                     : :**********:..
BoxShade v3.31 C (beta, 970507) Output
AT4G17810.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N G G A W M W N P N K I E E L E D D D E S W E V K A F E
pt011576_POPTR_    M A A E I G L L S L T Q L Q N L P Q S H Q N Q Y Q H Q R N P S E T P S F W M W N P K Q T Q E - - - D D D S W E V R A F A
 
AT4G17810.1     Q D T K G N I S G T T W P P R S Y T C N F C R R E F R S A Q A L G G H M N V H R R D R A S S R A H Q - - - G S T V A A A
pt011576_POPTR_    E D T - G N I N G T T W P P R S Y T C T F C R R E F R S A Q A L G G H M N V H R R D R A - - R L H Q T Q P G S T N P H S
 
AT4G17810.1     A R S G H G G M L L N S C A P P L P T T T L I I - - Q S T A S N I E G L S H F Y Q L Q N P S G I F - - - - - - - - - - G
pt011576_POPTR_    S T S S S S - - - - - - - - - - - - S S T L I I P T Q E F P P N - S G L C L L Y Q L P N P N G V F T P T N M T A C S I D
 
AT4G17810.1     N S G D M V N L Y G T T S F P P S N L P F S M L N S P V E V P P R L I E - - - Y S T G D D E S I G S M K E A T G T - - -
pt011576_POPTR_    S S S T L I S I - - - T P Y P H N N L V G P S L N F P V - A P P E I S T S H C Y S N I K A E P S A S T D H S N G I K N N
 
AT4G17810.1     - - - - - S V D E L D L E L R L G H H P P -
pt011576_POPTR_    N C K E L A N E E L D L E L R L G H R S S S
 
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