fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025459 not found in 604aa AT4G17880.1 1st_1st 0.483248730 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17880.1     -----------------------------MSPTNVQVTDYHLNQSKTDTTNLWSTDDDAS
gm025459_Glyma0 MVRIRTPCLRKSGRFAEGSHSLSLVLECFLSVTN---PNHQLSQR----MNLW-TDENSS
                                             :* **   .:::*.*      *** **:::*

AT4G17880.1     VMEAFIGGGSDHSSLFPPLPPPPLPQ----VNEDNLQQRLQALIEGANENWTYAVFWQSS
gm025459_Glyma0 VMEAFM-PSSDLSSIWPP-PAPPQPQSTAVFNQDTLQHRLQALIEGARETWTYAIFWQSS
                *****:  .** **::** *.** **    .*:*.**:*********.*.****:*****

AT4G17880.1     HGFAGEDNNNNNTVLLGWGDGYYKGEEEKSR-KKKSNPASAAEQEHRKRVIRELNSLISG
gm025459_Glyma0 YDYSG-------STLLGWGDGYYKGDDDKAKAKAKSKATSAAEQDHRKKVLRELNSLISG
                :.::*       :.***********:::*:: * **:.:*****:***:*:*********

AT4G17880.1     --GVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGLPGQAFSNSDTIWLSGSNALAGSSC
gm025459_Glyma0 SSSASASDDV-DEEVTDTEWFFLVSMTQSFVNGGGLPGQAFFNSTPVWVTGSDRLSASPC
                  .....*:. ********************:* ******* ** .:*::**: *:.*.*

AT4G17880.1     ERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFFNFNNGGGEFGSWAF
gm025459_Glyma0 ERARQGHMFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVKVLFNFSNNNFDMGSSWP
                ******:::****:**:.: ********:*:*.*.***::**..:***.*.. ::**   

AT4G17880.1     NLNPDQGENDP-GLWISEPNGVDSGLVAAPVMNNGGNDSTSNSDSQPISKLCNGSSVENP
gm025459_Glyma0 ATSADQGENDPSSLWLSDPESRRTSY--------GGVNGNTNTNTNSNSHFFSGQS----
                  ..******* .**:*:*:.  :.         ** :..:*::::. *:: .*.*    

AT4G17880.1     NPKVLKSCEMVNFKNGIENGQEEDSSNKKRSPVS--NNEEGMLSFTS--VLPC-------
gm025459_Glyma0 -PFVAAVDE--NKKNNMSN------NGKKRSPNSRGSNDDGMLSFTSGVIIPATNLKSGG
                 * *    *  * **.:.*      ..***** *  .*::*******  ::*.       

AT4G17880.1     --DSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQ
gm025459_Glyma0 GGDSDHSDLEASVVKDP-----VVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQ
                  **:********.*:.     ******:*******************************

AT4G17880.1     RFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAK
gm025459_Glyma0 RFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTLESDKDVLHKQLEGVKKELEKTT
                ***:************************:*******. ****: *:**:: ::**  ::.

AT4G17880.1     SSVKDRKCLNQESS--------VLIEM-EVDVKIIGWDAMIRIQCSKRNHPGAKFMEALK
gm025459_Glyma0 DNVSSNHACNNNNNNKLSSNQPALIDLVEMDVKIIGWDAMITITCSKKNHPAATLMTALM
                ..*...:. *::..        .**:: *:*********** * ***:***.*.:* ** 

AT4G17880.1     ELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGECP
gm025459_Glyma0 ELDLDVHYATVTLVNDLMIQQATVKMGSRFYTQEQLRAALSAKVGDVR
                ****:*::*::::**************.:*:**:**:.**: ***:
BoxShade v3.31 C (beta, 970507) Output
AT4G17880.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S P T N V Q V T D Y H L N Q S K T D T T N L W S T D D D A S
gm025459_Glyma0    M V R I R T P C L R K S G R F A E G S H S L S L V L E C F L S V T N - - - P N H Q L S Q R - - - - M N L W - T D E N S S
 
AT4G17880.1     V M E A F I G G G S D H S S L F P P L P P P P L P Q - - - - V N E D N L Q Q R L Q A L I E G A N E N W T Y A V F W Q S S
gm025459_Glyma0    V M E A F M - P S S D L S S I W P P - P A P P Q P Q S T A V F N Q D T L Q H R L Q A L I E G A R E T W T Y A I F W Q S S
 
AT4G17880.1     H G F A G E D N N N N N T V L L G W G D G Y Y K G E E E K S R - K K K S N P A S A A E Q E H R K R V I R E L N S L I S G
gm025459_Glyma0    Y D Y S G - - - - - - - S T L L G W G D G Y Y K G D D D K A K A K A K S K A T S A A E Q D H R K K V L R E L N S L I S G
 
AT4G17880.1     - - G V G G G D E A G D E E V T D T E W F F L V S M T Q S F V K G T G L P G Q A F S N S D T I W L S G S N A L A G S S C
gm025459_Glyma0    S S S A S A S D D V - D E E V T D T E W F F L V S M T Q S F V N G G G L P G Q A F F N S T P V W V T G S D R L S A S P C
 
AT4G17880.1     E R A R Q G Q I Y G L Q T M V C V A T E N G V V E L G S S E I I H Q S S D L V D K V D T F F N F N N G G G E F G S W A F
gm025459_Glyma0    E R A R Q G H M F G L Q T L V C I P S A N G V V E L G S T E L I F Q N S D L M N K V K V L F N F S N N N F D M G S S W P
 
AT4G17880.1     N L N P D Q G E N D P - G L W I S E P N G V D S G L V A A P V M N N G G N D S T S N S D S Q P I S K L C N G S S V E N P
gm025459_Glyma0    A T S A D Q G E N D P S S L W L S D P E S R R T S Y - - - - - - - - G G V N G N T N T N T N S N S H F F S G Q S - - - -
 
AT4G17880.1     N P K V L K S C E M V N F K N G I E N G Q E E D S S N K K R S P V S - - N N E E G M L S F T S - - V L P C - - - - - - -
gm025459_Glyma0    - P F V A A V D E - - N K K N N M S N - - - - - - N G K K R S P N S R G S N D D G M L S F T S G V I I P A T N L K S G G
 
AT4G17880.1     - - D S N H S D L E A S V A K E A E S N R V V V E P E K K P R K R G R K P A N G R E E P L N H V E A E R Q R R E K L N Q
gm025459_Glyma0    G G D S D H S D L E A S V V K D P - - - - - V V E P E K R P R K R G R K P A N G R E E P L N H V E A E R Q R R E K L N Q
 
AT4G17880.1     R F Y S L R A V V P N V S K M D K A S L L G D A I S Y I S E L K S K L Q K A E S D K E E L Q K Q I D V M N K E A G N A K
gm025459_Glyma0    R F Y A L R A V V P N V S K M D K A S L L G D A I S Y I T E L K S K L Q T L E S D K D V L H K Q L E G V K K E L E K T T
 
AT4G17880.1     S S V K D R K C L N Q E S S - - - - - - - - V L I E M - E V D V K I I G W D A M I R I Q C S K R N H P G A K F M E A L K
gm025459_Glyma0    D N V S S N H A C N N N N N N K L S S N Q P A L I D L V E M D V K I I G W D A M I T I T C S K K N H P A A T L M T A L M
 
AT4G17880.1     E L D L E V N H A S L S V V N D L M I Q Q A T V K M G N Q F F T Q D Q L K V A L T E K V G E C P
gm025459_Glyma0    E L D L D V H Y A T V T L V N D L M I Q Q A T V K M G S R F Y T Q E Q L R A A L S A K V G D V R
 
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